Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1 118 5e-22 >seq1 Length=7344524 Score = 118 bits (130), Expect = 5e-22 Identities = 154/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| ||||||||||| || || || || || | || | || ||||| || Sbjct 2685505 CATGAACAAATCCGGAATCCACATAGCGTAGAACAAGTCACGAGCGCGCAACTCTTCCTT 2685446 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||| || || || || || | ||| || || | ||||| |||||| || || | || Sbjct 2685445 ACCGTGGTTTTTCTTCAGTTCCAGGAAGTCGAATACATCTGCGTGCCAGGGCTCCAGGTA 2685386 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 ||||| || |||||| | || || ||||| || || ||||| | ||||| || || Sbjct 2685385 AATAGCGAAGGCACCTTTACGCTTACCACCACCCTGGTCAACGTAGCGGGCAGTGTCGTT 2685326 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 ||| ||||||||||| || || ||| | |||| Sbjct 2685325 GAATACTTTCAACATCGGTAC-AATACCGTTG 2685295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037742566900