Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_021331.1 Length=51821 Score E Sequences producing significant alignments: (Bits) Value seq493 102 3e-17 >seq493 Length=52014 Score = 102 bits (112), Expect = 3e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 38170 TTTGCAACTGGTGGATACACTGGCGACGGCGGGAAGTATGAGCCAGCAGGTGTTGTTCAT 38229 |||||||| || |||| || || |||||| || ||||||||||| || ||||||| Sbjct 19753 TTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCAC 19812 Query 38230 AAAGGCGAGTTTGTCATGACGAAGGAGGCCACGAAGCGGATCGGAGTTGGAAACCTTTAC 38289 || ||||||||| | ||||||||||| || | ||||| || || || || |||||| Sbjct 19813 CGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTAC 19872 Query 38290 AAAATGATGCGCGGTTATGCAAATGGCGG 38318 |||||||||| ||||| | ||||| Sbjct 19873 CGGCTGATGCGCGGCTATGCCACCGGCGG 19901 Score = 102 bits (112), Expect = 3e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 38170 TTTGCAACTGGTGGATACACTGGCGACGGCGGGAAGTATGAGCCAGCAGGTGTTGTTCAT 38229 |||||||| || |||| || || |||||| || ||||||||||| || ||||||| Sbjct 24333 TTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCAC 24392 Query 38230 AAAGGCGAGTTTGTCATGACGAAGGAGGCCACGAAGCGGATCGGAGTTGGAAACCTTTAC 38289 || ||||||||| | ||||||||||| || | ||||| || || || || |||||| Sbjct 24393 CGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTAC 24452 Query 38290 AAAATGATGCGCGGTTATGCAAATGGCGG 38318 |||||||||| ||||| | ||||| Sbjct 24453 CGGCTGATGCGCGGCTATGCCACCGGCGG 24481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165704159604072