Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq493 86.0 1e-12 >seq493 Length=52014 Score = 86.0 bits (94), Expect = 1e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 12157 ACAGCGCGTAAAGGGATTATCCAGCTCAGCAATGCCACTGACAGCACGTCTGAGACGCTG 12216 ||| || | || ||||| | |||||||||| ||| || ||||||||||||| ||||| Sbjct 32317 ACAACGAGAAAGGGGATAGTGCAGCTCAGCAGTGCAACCAACAGCACGTCTGAAACGCTT 32376 Query 12217 GCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGATAATGCGAAC 12261 || |||||||| || |||||||| | || |||||| | ||||| Sbjct 32377 GCTGCAACGCCAAAGGCGGTTAAGGTGGTAATGGATGAAACGAAC 32421 Score = 86.0 bits (94), Expect = 1e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 12157 ACAGCGCGTAAAGGGATTATCCAGCTCAGCAATGCCACTGACAGCACGTCTGAGACGCTG 12216 ||| || | || ||||| | |||||||||| ||| || ||||||||||||| ||||| Sbjct 36451 ACAACGAGAAAGGGGATAGTGCAGCTCAGCAGTGCAACCAACAGCACGTCTGAAACGCTT 36510 Query 12217 GCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGATAATGCGAAC 12261 || |||||||| || |||||||| | || |||||| | ||||| Sbjct 36511 GCTGCAACGCCAAAGGCGGTTAAGGTGGTAATGGATGAAACGAAC 36555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95051973753536