Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq1 109 2e-19 >seq1 Length=7344524 Score = 109 bits (120), Expect = 2e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 35344 GTGGTTGCTCACTTTCACTTAGTAATGG-TATTTCTGCATTGTACGGATTCTTTGCTGGT 35402 || ||||||||||| ||| | || |||| | | | || || | |||| | | ||||||| Sbjct 600851 GTTGTTGCTCACTTCCACATTGTGATGGGTGTAGCAGCCTTCTTCGGAATGTATGCTGGT 600910 Query 35403 GTTTACCACTGGTTTCCAAAAATGTTCGGGCGTATGATGAATAAAAATTTAGGTTATATT 35462 ||||||||||||| || || |||| || ||| | ||||| | | | ||| | ||| Sbjct 600911 ATTTACCACTGGTTCCCTAAGATGTATGGCCGTTTCATGAACGACACACTGGGTAAGATT 600970 Query 35463 CACTTTTGGATTACTGCAATTTGTGCTTATGGTGTTTTCTATCCAATGCACTTTATAGGG 35522 ||||| ||| ||| | ||||||| | | |||| |||||||||| || || Sbjct 600971 CACTTCTGGGGTACAATGGTAGGTGCTTACGCAATCTTCTGGCCAATGCACTACATTGGT 601030 Query 35523 ATGGCTGGATTACCACGTCGTTACTACACA 35552 |||||||| |||| |||||||||||| || Sbjct 601031 ATGGCTGGTGTACCTCGTCGTTACTACTCA 601060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150206694316960