Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq439 109 1e-19 >seq439 Length=70264 Score = 109 bits (120), Expect = 1e-19 Identities = 179/257 (70%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 18887 TCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCACACGGCCATCAGAAGTGCA 18946 |||||||| |||| |||| | || || || ||||||||||||||||| | || Sbjct 63515 TCAGAATGCACCATGACCTTTCCGTCGGGCTTTCGCCGCCACACGGCCATCAGCAAGGCT 63574 Query 18947 TTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCAGCCAATAACTTTGCGCGAG 19006 | || | | | || | ||||| | | ||| |||||||| | || |||||| Sbjct 63575 TGCAAGGCGAGGTCGGTGGTCATGCACGATTGCGCCGACCAGCCGACCACGCGGCGCGAA 63634 Query 19007 AACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTGAGTCCGGATGTAGGTGATG 19066 |||||||| | || ||| ||||||||||||||| ||||| ||| ||||||||||||| Sbjct 63635 AACAGGTCGATGACGACACACAGATACAGCCAGCCCTCGTGGGTCTTGATGTAGGTGATG 63694 Query 19067 TCCGTTACCCAACGCTCATCCGGTGCTTCCGAGTTGAACTGCCGCTGGAGCCTGTTGGGC 19126 || || ||||| || ||| || || | | |||| | ||| |||||||| Sbjct 63695 TCGGTCACCCAGACCTGATCGGGCGCAGAGGCTTGGAACCTCTGCTCCAGCCTGTTCTCA 63754 Query 19127 GTCACGAT-GCTGGTTT 19142 | |||||| ||||| || Sbjct 63755 GACACGATGGCTGGCTT 63771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127102895148480