Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq493 82.4 2e-11 >seq493 Length=52014 Score = 82.4 bits (90), Expect = 2e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 12625 AGGATGCCACCACAGCGCGAAAAGGTCTTGTCCAGCTCAGTAGCGCCACCAACAGCGATT 12684 ||||||| |||| || |||| || | || |||||||| || || ||||||||| | Sbjct 32306 AGGATGCGGACACAACGAGAAAGGGGATAGTGCAGCTCAGCAGTGCAACCAACAGCACGT 32365 Query 12685 CTGAAACGCTTGCGGCAACACCAAAAGCGGTGAAG 12719 ||||||||||||| ||||| ||||| ||||| ||| Sbjct 32366 CTGAAACGCTTGCTGCAACGCCAAAGGCGGTTAAG 32400 Score = 82.4 bits (90), Expect = 2e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 12625 AGGATGCCACCACAGCGCGAAAAGGTCTTGTCCAGCTCAGTAGCGCCACCAACAGCGATT 12684 ||||||| |||| || |||| || | || |||||||| || || ||||||||| | Sbjct 36440 AGGATGCGGACACAACGAGAAAGGGGATAGTGCAGCTCAGCAGTGCAACCAACAGCACGT 36499 Query 12685 CTGAAACGCTTGCGGCAACACCAAAAGCGGTGAAG 12719 ||||||||||||| ||||| ||||| ||||| ||| Sbjct 36500 CTGAAACGCTTGCTGCAACGCCAAAGGCGGTTAAG 36534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107487065660560