Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=3173221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 101324 TATCTGGTAGGTGGCGCAGTACGTGACGGTTTGCTTGGTCGTGAAGTTCATGACCGTGAC 101383 |||||||| || || || || ||||||| || || || | ||| || | ||||| ||| Sbjct 1304556 TATCTGGTTGGCGGTGCCGTTCGTGACGAATTACTGGGCCTTGAGGTCAAGGACCGGGAC 1304497 Query 101384 TACGTGGTTGTGGGTGCAACGCACGAAGAAATGATCAATAAAGGTTTCACCCAGGTTGGC 101443 | ||||| || || || || | | |||||| | || || |||| ||||| ||| Sbjct 1304496 TGGGTGGTGGTCGGCGCGACACCAAAGGAAATGCTTGCCAAGGGGTTCAAACAGGTGGGC 1304437 Query 101444 GCTGCTTTTCCAGTATACCTGCATCCTGAAACCAACGAAGAGTATGCTTTGGCCCGTACC 101503 || | ||||| || | ||||| || ||| ||||| ||||| |||| || ||| Sbjct 1304436 GCGGACTTTCCGGTCTTTCTGCACCCCCGCACCCGGGAAGAATATGCCCTGGCTCGCACC 1304377 Query 101504 GAGCGC-AAGACGGGC 101518 |||||| |||| |||| Sbjct 1304376 GAGCGCAAAGAGGGGC 1304361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475282051129440