Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_022973.1 Length=50755 Score E Sequences producing significant alignments: (Bits) Value seq19 87.8 6e-13 seq5 82.4 2e-11 seq4 82.4 2e-11 >seq19 Length=1029424 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 4133 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTC 4192 || ||||||||||||||| |||||||||||||||||| |||| ||||| ||||||| || Sbjct 1022417 GGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATTC 1022358 Query 4193 CTCCCTGGCCCGC 4205 | ||||||| || Sbjct 1022357 CCTCCTGGCCTGC 1022345 >seq5 Length=3486096 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 4133 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTC 4192 || |||||| |||||||||||||| ||||||||||| ||| |||||| |||||||||| Sbjct 711213 GGCCAGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAAGTTGGGGGTTCGAGTC 711272 Query 4193 CTCCCTGGCCCGC 4205 | ||||||| || Sbjct 711273 CCTCCTGGCCTGC 711285 >seq4 Length=3599618 Score = 82.4 bits (90), Expect = 2e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 4134 GTCAGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCC 4193 |||||||||||||||||||||||| ||||||||||| ||| | |||| ||||| ||||| Sbjct 3258221 GTCAGTAGCTCAATTGGTAGAGCATCGGTCTCCAAAACCGAGGGTTGCGGGTTCAAGTCC 3258162 Query 4194 TCCCTGGC 4201 |||||| Sbjct 3258161 CTCCTGGC 3258154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162292989255928