Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 4e-13 >seq3 Length=4400433 Score = 87.8 bits (96), Expect = 4e-13 Identities = 165/241 (68%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 35619 GACCAACTTCAATGGGTTATTGACGAAATTAAACGAAACCCAAACAGCCGCCGCTTAATG 35678 ||||| |||||||||| | |||||||| | || |||||| |||||| | || Sbjct 1995353 GACCAGATTCAATGGGTGCTCGACGAAATCCGCAGCAATCCAAACTCCCGCCGTATGGTG 1995412 Query 35679 GTGAACGCTTGGAACACCGGAGAATTACATAAAATGGCGCTGCCGCCTTGTCATTTTGCC 35738 || || |||||| ||| || | | | | |||||||||||||| ||||| |||| Sbjct 1995413 GTCTCAGCCTGGAACCCCGCTGATGTCCCTGATATGGCGCTGCCGCCCTGTCA--CTGCC 1995470 Query 35739 --TTTCAATTCAACGTCACCGATGGAAAATTAAATTGTATGGTTTACCAACGCAGCGGAG 35796 || |||||||| |||| ||||| | || || | |||| || ||| | | Sbjct 1995471 TGTTCCAATTCAATGTCATGGATGGGCGTCTGAACTGCCAGCTTTATCAGCGCTCGGCCG 1995530 Query 35797 ATATGTTTTTAGGGGTACCGTTTAACATCGCCGGTTATGCAGCTATAACCATGATGATTG 35856 |||| || | || || |||||||||||||| ||||| | | ||||||||||| | Sbjct 1995531 ATATTTTCCTCGGCGTGCCGTTTAACATCGCGTCATATGCGCTTTTGACCATGATGATGG 1995590 Query 35857 C 35857 | Sbjct 1995591 C 1995591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124926914063360