Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-11 >seq5 Length=3486096 Score = 86.0 bits (94), Expect = 5e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 |||||| |||||||| || | || ||||| ||||| || || ||||| | | || | Sbjct 928146 TTTATCCAGACCATAGGCCAGGGCGGCAGCGGTTGGCTCGTTGATAATACGCTTGACCTC 928087 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 ||| || || || | || ||||| || || || || | || |||||||||||||| || Sbjct 928086 AAGGCCGGCGATCTTGCCCGCATCCTTGGTTGCCTGGCGCTGGGAATCGTTAAAATACGC 928027 Query 282454 AGGAACAGTAATAACGGCATCTGTTAC 282480 ||||| || ||||| || || || || Sbjct 928026 GGGAACGGTGATAACCGCTTCCGTGAC 928000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740594461893432