Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_023743.1 Length=47180 Score E Sequences producing significant alignments: (Bits) Value seq493 91.5 4e-14 >seq493 Length=52014 Score = 91.5 bits (100), Expect = 4e-14 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 28223 ACCGCCGTTTGCGTATCCGCGCATCAACTTGTACAGGTTGTCTACGCCAATCCTTGAAGT 28282 ||||||| | || || |||||||||| | ||| || || | |||||||||| || Sbjct 19902 ACCGCCGGTGGCATAGCCGCGCATCAGCCGGTAAAGATTCCCCACGCCAATCCGGCTGGT 19843 Query 28283 TGCCTCCTTCGTAAACACGAATTCACCACGATGCACCGTACCAGCTGGTTCATACTTACC 28342 |||||||||||| || || || |||||||| || || | || ||||| ||||| || || Sbjct 19842 TGCCTCCTTCGTGAAGACAAACTCACCACGGTGAACAATCCCCGCTGGCTCATATTTGCC 19783 Query 28343 TCCGTTACCAGTGTAGCCACCAGATGCAAA 28372 ||| | || || | || || | |||||| Sbjct 19782 GCCGGTTCCCGTAAATCCTCCGGTTGCAAA 19753 Score = 91.5 bits (100), Expect = 4e-14 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 28223 ACCGCCGTTTGCGTATCCGCGCATCAACTTGTACAGGTTGTCTACGCCAATCCTTGAAGT 28282 ||||||| | || || |||||||||| | ||| || || | |||||||||| || Sbjct 24482 ACCGCCGGTGGCATAGCCGCGCATCAGCCGGTAAAGATTCCCCACGCCAATCCGGCTGGT 24423 Query 28283 TGCCTCCTTCGTAAACACGAATTCACCACGATGCACCGTACCAGCTGGTTCATACTTACC 28342 |||||||||||| || || || |||||||| || || | || ||||| ||||| || || Sbjct 24422 TGCCTCCTTCGTGAAGACAAACTCACCACGGTGAACAATCCCCGCTGGCTCATATTTGCC 24363 Query 28343 TCCGTTACCAGTGTAGCCACCAGATGCAAA 28372 ||| | || || | || || | |||||| Sbjct 24362 GCCGGTTCCCGTAAATCCTCCGGTTGCAAA 24333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150853088698128