Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_024210.1 Length=47112 Score E Sequences producing significant alignments: (Bits) Value seq493 82.4 2e-11 >seq493 Length=52014 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 15663 GGCGGTTATACTGGAAACGGTGGTAAGTACGAGCCAGCTGGCACGGTGCATAAAGGTGAA 15722 || || | ||| |||| ||| || || || |||||||| || | || || ||||| Sbjct 19762 GGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGTGGTGAG 19821 Query 15723 TTCGTCTTTACGAAGGAGGCAACCTCAAGGATTGGCGTTGATAACCTTTATAAGTTAATG 15782 || ||||| ||||||||||||||| |||||||||| | || ||||| | | ||| Sbjct 19822 TTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGGCTGATG 19881 Query 15783 CGCGGGTACGCAAACGGCGG 15802 ||||| || || | |||||| Sbjct 19882 CGCGGCTATGCCACCGGCGG 19901 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 15663 GGCGGTTATACTGGAAACGGTGGTAAGTACGAGCCAGCTGGCACGGTGCATAAAGGTGAA 15722 || || | ||| |||| ||| || || || |||||||| || | || || ||||| Sbjct 24342 GGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGTGGTGAG 24401 Query 15723 TTCGTCTTTACGAAGGAGGCAACCTCAAGGATTGGCGTTGATAACCTTTATAAGTTAATG 15782 || ||||| ||||||||||||||| |||||||||| | || ||||| | | ||| Sbjct 24402 TTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGGCTGATG 24461 Query 15783 CGCGGGTACGCAAACGGCGG 15802 ||||| || || | |||||| Sbjct 24462 CGCGGCTATGCCACCGGCGG 24481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150635490589616