Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq509 91.5 3e-13 seq2 91.5 3e-13 >seq509 Length=47832 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 73491 GGTGAAGTGGCAGAGTGGTTTAATGCAACGGTCTTGAAAACCGTCGAGGGTGAAAGTCCT 73550 ||||| ||||| ||||||||||| ||| ||||||||||||||| || | |||| || Sbjct 34409 GGTGAGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGCGTGAGAGCGTA 34350 Query 73551 CCGTGAGTTCAAATCTCACCTTCACCGCCA 73580 ||||| |||| |||| |||| ||||||||| Sbjct 34349 CCGTGGGTTCGAATCCCACCCTCACCGCCA 34320 >seq2 Length=6328565 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 73491 GGTGAAGTGGCAGAGTGGTTTAATGCAACGGTCTTGAAAACCGTCGAGGGTGAAAGTCCT 73550 ||||| ||||| ||||||||||| ||| ||||||||||||||| || | |||| || Sbjct 3046254 GGTGAGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGCGTGAGAGCGTA 3046195 Query 73551 CCGTGAGTTCAAATCTCACCTTCACCGCCA 73580 ||||| |||| |||| |||| ||||||||| Sbjct 3046194 CCGTGGGTTCGAATCCCACCCTCACCGCCA 3046165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115160741088108