Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq2 104 3e-17 >seq2 Length=6328565 Score = 104 bits (114), Expect = 3e-17 Identities = 137/186 (74%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 176493 GTCAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGC 176552 |||| || || ||||| ||||||||||| |||| || | ||||| ||| |||| ||| Sbjct 4240812 GTCAAAAGCGCATAAGATGCGATGTTGAAGGGAACGCCGAGAAAGACATCCGCGGAGCGC 4240871 Query 176553 TGATTCCAAA---GGCAGGACAGTTTCCCGTTGCGGACATAGAACTGGAAACCGTAGTGA 176609 || | ||| ||||||| ||||| |||| ||||||||||||||| | |||| Sbjct 4240872 TGGT---AAAGCTGGCAGGAGAGTTTGCCGTCCGCGACATAGAACTGGAACAGGGAGTGG 4240928 Query 176610 CACGGCGGCAAAGCCATTAGATCGACC-GCCCCGACATTCCAAGCCGAGACCATATGACG 176668 |||||||||| |||||| ||| ||| | ||| ||||| |||||||| || | || Sbjct 4240929 CACGGCGGCAGCGCCATTTCATCAACCAGGGCCG-GGTTCCAGGCCGAGACGATCAGGCG 4240987 Query 176669 ACGGCT 176674 ||||| Sbjct 4240988 GCGGCT 4240993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622909500325920