Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_027299.1 Length=42092 Score E Sequences producing significant alignments: (Bits) Value seq371 114 3e-21 >seq371 Length=98968 Score = 114 bits (126), Expect = 3e-21 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 38923 TACCGCGTGACAGCGAATGAATTGCGCCAGTTCGTAGAACGGATCGAACGGCTGGATGCC 38982 ||||||||||| ||| ||||||||||||||| | |||||| |||| |||||||| ||| Sbjct 4808 TACCGCGTGACCGCGGGCGAATTGCGCCAGTTCATCGAACGGGTCGAGCGGCTGGAAGCC 4749 Query 38983 GAGAAGAAAGACCTCGCGGACCAGCGCAAGGACGTATTCGCGGAAGCCAAGGCGCGAGGC 39042 || ||||| ||||| || || ||| |||||| || | || |||||||||| ||| || Sbjct 4748 GAAAAGAAGGACCTGGCCGAGCAGATCAAGGAAGTCATGGCCGAAGCCAAGGGGCGCGGG 4689 Query 39043 TACGAC 39048 || ||| Sbjct 4688 TATGAC 4683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134571630225936