Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq509 84.2 5e-11 seq2 84.2 5e-11 >seq509 Length=47832 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 210921 TGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAAGAC 210980 ||||||||| |||| |||| |||| ||||| || || | | || ||||||||||||| Sbjct 34320 TGGCGGTGAGGGTGGGATTCGAACCCACGGTACGCTCTCACGCACGGCGGTTTTCAAGAC 34379 Query 210981 CGTTGCATTAAACCGCTCTGCCACTTCACCA 211011 || ||| ||||||| ||| ||||| |||||| Sbjct 34380 CGCTGCCTTAAACCACTCGGCCACCTCACCA 34410 >seq2 Length=6328565 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 210918 TTTTGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAA 210977 || ||||||||| |||| |||| |||| ||||| || || | | || |||||||||| Sbjct 3046162 TTATGGCGGTGAGGGTGGGATTCGAACCCACGGTACGCTCTCACGCACGGCGGTTTTCAA 3046221 Query 210978 GACCGTTGCATTAAACCGCTCTGCCACTTCACCA 211011 ||||| ||| ||||||| ||| ||||| |||||| Sbjct 3046222 GACCGCTGCCTTAAACCACTCGGCCACCTCACCA 3046255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113819953663136