Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq6 141 9e-29 >seq6 Length=3173221 Score = 141 bits (156), Expect = 9e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 58102 CGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATCTCGATTACGT 58161 ||| || || || || ||||| ||||||||||| |||||||| ||| | ||| | || Sbjct 993431 CGGATGCAAGGCCGGCCTGGTGTTCAACCCGGCCACGCCGCTGCATTACATGGATCATGT 993372 Query 58162 CATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTC 58221 ||||| || |||||| || | ||| |||||||||| ||||| ||||| || |||||| Sbjct 993371 GATGGATAAGCTGGATATGGTTCTGATGATGTCCGTAAACCCGGGCTTTGGTGGCCAGAA 993312 Query 58222 TTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGCATTGATGCGTCCGG 58281 || |||||| || || || || || || |||| || ||||||||||| | Sbjct 993311 GTTCATTCCGGGTACTCTCGACAAGCTCCGGGAAGCCCGCAAGCGCATTGATGCCAGCAA 993252 Query 58282 TTACGACATTCGCCTGGAAGTGGACGGCGGCGTGAA 58317 |||| |||| ||||||||| | ||||||||||| || Sbjct 993251 TTACAACATCCGCCTGGAAATTGACGGCGGCGTTAA 993216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471237288139360