Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028248.1 Length=136896 Score E Sequences producing significant alignments: (Bits) Value seq60 89.7 5e-13 seq4 86.0 5e-12 >seq60 Length=599436 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 95231 GCTGATGGCAGGACTTGAACCTGCAACCTATTGATTACAAATCAATTGCACTACCAATTG 95290 |||| || ||||||||||||| ||||||| ||||||||||||| |||| |||||||||| Sbjct 72270 GCTGGTGAAAGGACTTGAACCTTCAACCTACTGATTACAAATCAGTTGCTCTACCAATTG 72211 Query 95291 TGCTACATCAGC 95302 |||||| |||| Sbjct 72210 AGCTACACCAGC 72199 >seq4 Length=3599618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 95060 AAGTGGTCTCCACGGAGTGATTCGAACACTCGACCTCCTGATCCCAAATCAGGCGCTCTA 95119 |||||||| |||| | ||||||||| | |||| ||||| ||||||| ||||||||||| Sbjct 3361101 AAGTGGTCGGGACGGCGAGATTCGAACTCACGACATCCTGCTCCCAAAGCAGGCGCTCTA 3361160 Query 95120 CCAAGCTGAGCTACG 95134 ||| ||||||||||| Sbjct 3361161 CCAGGCTGAGCTACG 3361175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437935192856320