Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=3486096 Score = 84.2 bits (92), Expect = 2e-11 Identities = 197/295 (67%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 101367 TATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCATGACCGTGAT 101426 ||||| || || || |||||||| ||| || ||||| | || | || ||||| Sbjct 3152316 TATCTTGTTGGCGGTGCTGTTCGCGATCAACTCCTGGGCTGCGAGGTAAAAGAGCGTGAC 3152375 Query 101427 TACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTTTCACCCAGGTTGGC 101486 | || ||||| || | | | || ||| | ||| || ||| ||||| ||| Sbjct 3152376 TGGGTCGTTGTCGGCAGTTCCCCGGCAGCCATGCTAGAAGCTGGCTTCCAGCAGGTAGGC 3152435 Query 101487 GCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTGGCCCGTACT 101546 | |||||| || | |||| ||||||||||||||||||| || | ||||| Sbjct 3152436 AAAGATTTCCCCGTATTCTTGAGCCCTGAAACCAAAGAAGAATTTGCGTTAGCCCGCCAG 3152495 Query 101547 GAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTTCAGCCC-GGATGTAAC 101605 || || ||| | || ||| ||| | || ||||||||||| | || ||| |||| | || Sbjct 3152496 GAACGCAAAGTAGCTGCAGGGCATTCGGGATTTGAGACCTT-TACATCCCAGGATATCAC 3152554 Query 101606 TCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGCTAAAGAC 101660 || ||| |||| | | || | || ||||| ||||| || || || |||||| Sbjct 3152555 GCTTGAACAGGACCTGGCACGCAGGGATCTGACCATCAACGCCATTGCCAAAGAC 3152609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457426214511840