Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq493 104 6e-18 >seq493 Length=52014 Score = 104 bits (114), Expect = 6e-18 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 22734 CTCCATAAAACAAAACCCGTCGTAGCGAGTTCAGACAAAATAAATCCCCGCGAGTACGAG 22793 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| Sbjct 47259 CTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAATAAATCCCCGCGAGTGCGAG 47318 Query 22794 GA-TGTTAT 22801 || |||||| Sbjct 47319 GATTGTTAT 47327 Score = 104 bits (114), Expect = 6e-18 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 22734 CTCCATAAAACAAAACCCGTCGTAGCGAGTTCAGACAAAATAAATCCCCGCGAGTACGAG 22793 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| Sbjct 50039 CTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAATAAATCCCCGCGAGTGCGAG 50098 Query 22794 GA-TGTTAT 22801 || |||||| Sbjct 50099 GATTGTTAT 50107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132158851199200