Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=3486096 Score = 84.2 bits (92), Expect = 2e-11 Identities = 178/263 (68%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 129187 GCAATTTCACGATGGGTCTGTGATTCTGTAGTACGAGCACCAATAGCGACCCAACTAAAA 129246 || |||||||| ||||| || ||||| || || || || || || || ||| || | Sbjct 2130283 GCCATTTCACGGTGGGTTTGGGATTCCGTCGTGCGCGCGCCGATGGCTGACCAGCTGATT 2130224 Query 129247 ATACCTGATAGATACTTAATAGTAAATGGGTCCAAGACCTCTGTCGCCAAAGGAAGTCCA 129306 | | || || |||| |||| ||||| | | ||||||| || || || Sbjct 2130223 AAATCTTGCAGGTACTGTGGCGTAATAGGGTCGAGCGCTTCTGTCGAGGTTGGTAGCCCC 2130164 Query 129307 AGATTCA---ATAGTTCTAAACAGAGATGGCGGGCAATTCTTAACCCTTCATCAATATTA 129363 || |||| ||| || ||| || | |||||| |||| | |||| || | | | Sbjct 2130163 AG-TTCAGCGATA--TCCAAAAGTAGTTTGCGGGCGGTTCTAAGACCTTTTTCGACCTCA 2130107 Query 129364 AAAGAACCATTTAATTCTGGGTCGTTGACTAGGCCTTTCCAACCTACAGTTGTGCGTGGT 129423 ||| | ||| | | |||||||| | || ||||||||||| ||||| || |||||| Sbjct 2130106 AAACTATCATCCATATTGGGGTCGTTAATCAGACCTTTCCAACCAACAGTGGTACGTGGT 2130047 Query 129424 TTTTCAAAATAAACCCGCATAAC 129446 |||||||| ||||||||||| || Sbjct 2130046 TTTTCAAAGTAAACCCGCATCAC 2130024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518232058133280