Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq5 80.6 7e-11 >seq5 Length=3486096 Score = 80.6 bits (88), Expect = 7e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCG 31313 |||||| | || ||||||||||||| || ||| ||| ||||||| ||| |||||||||| Sbjct 3083296 TGGCTGGGGTGGGAGGATTCGAACCTCCGCATGACGGGATCAAAACCCGTTGCCTTACCG 3083237 Query 31314 CTTGGCGAC 31322 ||||||||| Sbjct 3083236 CTTGGCGAC 3083228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138197198710408