Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028897.1 Length=49421 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 5e-14 seq5 82.4 2e-11 >seq19 Length=1029424 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 4135 GGCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTC 4194 |||||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||| || Sbjct 1022417 GGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATTC 1022358 Query 4195 CTCCCTGGCCTGC 4207 | |||||||||| Sbjct 1022357 CCTCCTGGCCTGC 1022345 >seq5 Length=3486096 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 4135 GGCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTC 4194 ||||||||| |||| ||||||||| ||||||||||| ||| ||||| |||||||||| Sbjct 711213 GGCCAGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAAGTTGGGGGTTCGAGTC 711272 Query 4195 CTCCCTGGCCTGC 4207 | |||||||||| Sbjct 711273 CCTCCTGGCCTGC 711285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158024226362472