Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq493 109 6e-19 >seq493 Length=52014 Score = 109 bits (120), Expect = 6e-19 Identities = 181/258 (70%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 159342 GGTGCTCCTATTCCATGGCCAACAGATACTCCTCCTGCGGGTTATGCTTTAATGACGGGT 159401 ||||| || || || |||||| |||||| ||| | || || | | ||| ||| Sbjct 32841 GGTGCGCCGATCCCGTGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGG 32900 Query 159402 CAGCCCTTTGACAAGAGCA-CATATCCCAAGCTTGCCGTTGCTTATCCATCAGGTACTAT 159460 ||| | |||||||| | || | || || || ||||| || || |||||||| ||| | Sbjct 32901 CAGGCGTTTGACAA-ATCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCT 32959 Query 159461 TCCGGATATGCGTGGACAAACTATTAAGGGTAAACCG---AGTGGTCGTGCCGTGCTGAG 159517 ||| |||||||| || || || ||||| ||||| || |||||||| || || Sbjct 32960 TCCTGATATGCGAGGCTGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATTGTC 33019 Query 159518 TGCGGAAGCTGATGGTATTAAGTCTCATAATCATAGTGCTTCTGCATCTAATACTGATTT 159577 | |||| ||||| |||||||| || | || ||||| |||||| ||| ||||| Sbjct 33020 TCAGGAACAGGATGGAATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGATTT 33079 Query 159578 GGGTACTAAAACCACATC 159595 ||| || ||||||||||| Sbjct 33080 GGGGACGAAAACCACATC 33097 Score = 109 bits (120), Expect = 6e-19 Identities = 181/258 (70%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 159342 GGTGCTCCTATTCCATGGCCAACAGATACTCCTCCTGCGGGTTATGCTTTAATGACGGGT 159401 ||||| || || || |||||| |||||| ||| | || || | | ||| ||| Sbjct 36975 GGTGCGCCGATCCCGTGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGG 37034 Query 159402 CAGCCCTTTGACAAGAGCA-CATATCCCAAGCTTGCCGTTGCTTATCCATCAGGTACTAT 159460 ||| | |||||||| | || | || || || ||||| || || |||||||| ||| | Sbjct 37035 CAGGCGTTTGACAA-ATCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCT 37093 Query 159461 TCCGGATATGCGTGGACAAACTATTAAGGGTAAACCG---AGTGGTCGTGCCGTGCTGAG 159517 ||| |||||||| || || || ||||| ||||| || |||||||| || || Sbjct 37094 TCCTGATATGCGAGGCTGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATTGTC 37153 Query 159518 TGCGGAAGCTGATGGTATTAAGTCTCATAATCATAGTGCTTCTGCATCTAATACTGATTT 159577 | |||| ||||| |||||||| || | || ||||| |||||| ||| ||||| Sbjct 37154 TCAGGAACAGGATGGAATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGATTT 37213 Query 159578 GGGTACTAAAACCACATC 159595 ||| || ||||||||||| Sbjct 37214 GGGGACGAAAACCACATC 37231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546497399503040