Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq318 87.8 2e-12 seq438 82.4 7e-11 >seq318 Length=132058 Score = 87.8 bits (96), Expect = 2e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 45279 TGGAGCATAGCGGACTTGAACCGCTGACATCTACCTTGCAAGGGTAGCGCTCTCCCAACT 45338 ||||| |||||||| ||||||||||||||| ||||||||||| |||||||| |||||| Sbjct 46510 TGGAGGTAAGCGGACTCGAACCGCTGACATCTGCCTTGCAAGGGCAGCGCTCTACCAACT 46451 Query 45339 GAGCTA 45344 |||||| Sbjct 46450 GAGCTA 46445 >seq438 Length=70375 Score = 82.4 bits (90), Expect = 7e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 45279 TGGAGCATAGCGGACTTGAACCGCTGACATCTACCTTGCAAGGGTAGCGCTCTCCCAACT 45338 ||||||||||||| | ||||||||||| ||| | ||| || | |||||||||||| || Sbjct 33560 TGGAGCATAGCGGGATCGAACCGCTGACCTCTTCGCTGCCAGCGAAGCGCTCTCCCAGCT 33501 Query 45339 GAGCTAATGCCCC 45351 ||||||||||||| Sbjct 33500 GAGCTAATGCCCC 33488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472152479765280