Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq2 104 7e-18 >seq2 Length=6328565 Score = 104 bits (114), Expect = 7e-18 Identities = 150/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 30317 AGCGGTTTCCACCTAACGGGATGTAAAGGTAGTCTCGCAGATAGCGGCTTAGGGTCATGT 30376 ||||||| || || | ||||||||| |||||||| | ||| | || ||||| |||| Sbjct 642826 AGCGGTTGCCGCCCAGCGGGATGTAGAGGTAGTCCCTGAGAAAATGGGACAGGGTAATGT 642767 Query 30377 GCCAACGCCGCCAGAAATCTTGAATATCAAG--CGCCTTGTAGGGCGAGTTGAAGTTTAT 30434 |||| || ||||||||||| | | || | ||||||||||| ||||||||||| | Sbjct 642766 GCCAGCGACGCCAGAAATC--GGAGATGCTGGTGGCCTTGTAGGGTGAGTTGAAGTTCAC 642709 Query 30435 TGGGAGCCAAATGTTAAAGAGAAGGGCCGCGCCTATGGCCATGTCGCAGTAACCGCTAAA 30494 || || | ||| || || ||||| || | ||||||||||| || || ||| Sbjct 642708 CGGCAGGCGGATGCCGAACAGGCGGGCCAGCCCCAGCGCCATGTCGCAATAGCCTGAAAA 642649 Query 30495 GTCAAAGTATAGTTGGAATGTGTAGGAAAG 30524 ||| || || || ||||| | |||| ||| Sbjct 642648 GTCGAAATAGAGCTGGAACGAATAGGCAAG 642619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156782637155080