Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_031050.1 Length=51802 Score E Sequences producing significant alignments: (Bits) Value seq493 107 6e-19 >seq493 Length=52014 Score = 107 bits (118), Expect = 6e-19 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 22855 GCAACGGGCGGCTACACTGGCGACGGCGGCAAGTATGCGCCAGCGGGCGTGGTTCACCGT 22914 ||||| || || | || || ||||||||| |||| ||||||||| | ||||||||| Sbjct 19756 GCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGT 19815 Query 22915 GGCGAGTTCGTTATGACGAAGGAGGCAACGAAGAGAATCGGTGTTGATAATCTTTACCGA 22974 || ||||| || | |||||||||||||| | | || || || | ||||||||||| Sbjct 19816 GGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGG 19875 Query 22975 ATGATGCGCGGCTATGC 22991 |||||||||||||||| Sbjct 19876 CTGATGCGCGGCTATGC 19892 Score = 107 bits (118), Expect = 6e-19 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 22855 GCAACGGGCGGCTACACTGGCGACGGCGGCAAGTATGCGCCAGCGGGCGTGGTTCACCGT 22914 ||||| || || | || || ||||||||| |||| ||||||||| | ||||||||| Sbjct 24336 GCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGT 24395 Query 22915 GGCGAGTTCGTTATGACGAAGGAGGCAACGAAGAGAATCGGTGTTGATAATCTTTACCGA 22974 || ||||| || | |||||||||||||| | | || || || | ||||||||||| Sbjct 24396 GGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGG 24455 Query 22975 ATGATGCGCGGCTATGC 22991 |||||||||||||||| Sbjct 24456 CTGATGCGCGGCTATGC 24472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165643360132576