Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 5e-11 >seq5 Length=3486096 Score = 82.4 bits (90), Expect = 5e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 6708 CCGTAGCTCAGCGGTTTAGAGCAGCTGATTCTTAATCAGCGGGTCGAAGGTTCAAATCCT 6767 |||||||||||| | |||||||| | || || ||||| || |||||||||||||| |||| Sbjct 549953 CCGTAGCTCAGCTGGTTAGAGCATCCGACTCATAATCGGCAGGTCGAAGGTTCAAGTCCT 549894 Query 6768 TCCGGGGGCACGATGTTC 6785 |||||| ||| || ||| Sbjct 549893 TCCGGGCCCACCATTTTC 549876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313907599526844