Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq36 165 2e-35 seq53 147 5e-30 seq5 145 2e-29 seq3 143 6e-29 seq63 140 7e-28 seq1 109 1e-18 seq2 100 6e-16 seq6 98.7 2e-15 seq58 95.1 3e-14 seq452 93.3 9e-14 seq426 84.2 5e-11 >seq36 Length=729648 Score = 165 bits (182), Expect = 2e-35 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||||||||| || || || | || ||||| |||||||||||||| Sbjct 222049 CCGCCGCGCAGGCGAAGAACAAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTC 221990 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| ||| || || ||| ||| Sbjct 221989 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCAGGCGGG 221930 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| ||| || ||| ||||| |||||||| | || || Sbjct 221929 ATACCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTCGATCGTGTCCGAGGGCTCCAC 221871 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 221870 GTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 221823 Score = 149 bits (164), Expect = 1e-30 Identities = 148/189 (78%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||| ||||| || || || |||||||||||| Sbjct 221026 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATC 220967 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || || ||| ||| || ||||||||||| |||||||| ||| || ||| || Sbjct 220966 AGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTC 220908 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| | || || || || ||||| ||||| ||||| | ||||| ||||| Sbjct 220907 GATCGTGTCCGAGGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 220848 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 220847 GATCTGCAT 220839 Score = 149 bits (164), Expect = 1e-30 Identities = 148/189 (78%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||| ||||| || || || |||||||||||| Sbjct 221518 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATC 221459 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || || ||| ||| || ||||||||||| |||||||| ||| || ||| || Sbjct 221458 AGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTC 221400 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| | || || || || ||||| ||||| ||||| | ||||| ||||| Sbjct 221399 GATCGTGTCCGAGGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 221340 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 221339 GATCTGCAT 221331 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||| ||||| || || || |||||||||||| Sbjct 220064 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATC 220005 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| || || ||||||||||| ||||| ||| || ||| ||| Sbjct 220004 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTTTGCTTCACGCCGTCG 219945 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 || |||||||| | ||||| || || ||||| ||||| ||||| | |||||| ||||| Sbjct 219944 ATCGTGTCCGAGGGCTCGACATCTAGGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAA 219885 Query 283092 ATCTG 283096 ||||| Sbjct 219884 ATCTG 219880 Score = 145 bits (160), Expect = 2e-29 Identities = 147/189 (78%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||| ||||| || || || ||||| |||||| Sbjct 220537 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 220478 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || || ||| ||| || ||||||||||| |||||||| ||| || ||| || Sbjct 220477 AGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTC 220419 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| | || || || || ||||| ||||| ||||| | ||||| ||||| Sbjct 220418 GATCGTGTCCGAGGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 220359 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 220358 GATCTGCAT 220350 >seq53 Length=625924 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| | || || || || | ||| || || |||||||||||||| Sbjct 124941 CCACCGCGCAGTCTCAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 125000 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 125001 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 125060 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| ||| || ||| ||||| |||||||| | || || Sbjct 125061 ATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTCGATCGTGTCCGAGGGCTCCAC 125119 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 125120 GTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 125167 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| | || || || || | ||| || || |||||||||||||| Sbjct 125169 CCACCGCGCAGTCTCAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 125228 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 125229 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 125288 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| ||| || ||| ||||| |||||||| | || || Sbjct 125289 ATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTCGATCGTGTCCGAGGGCTCCAC 125347 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 125348 GTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 125395 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| | || || || || | ||| || || |||||||||||||| Sbjct 124713 CCCCCGCGCAGCCTCAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 124772 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 124773 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 124832 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| ||| || ||| ||||| |||||||| | || || Sbjct 124833 ATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTCGATCGTGTCCGAGGGCTCCAC 124891 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 124892 GTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 124939 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| | || || || || | ||| || || |||||||||||||| Sbjct 125397 CCACCGCGCAGTCTCAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 125456 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 125457 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 125516 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| ||| || ||| ||||| |||||||| | || || Sbjct 125517 ATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTCGATCGTGTCCGAGGGCTCCAC 125575 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||| | ||||| ||||| || ||||| Sbjct 125576 GTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCAT 125623 Score = 136 bits (150), Expect = 8e-27 Identities = 144/187 (77%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||| ||||| || || || ||||| |||||| Sbjct 126095 TTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 126154 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | || || ||||| || || ||||||||||| |||||||| ||| || ||| || Sbjct 126155 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGC-TTCACGCCGTC 126213 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| | || || ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 126214 GATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 126273 Query 283091 TATCTGC 283097 |||||| Sbjct 126274 AATCTGC 126280 >seq5 Length=3486096 Score = 145 bits (160), Expect = 2e-29 Identities = 305/445 (69%), Gaps = 16/445 (4%) Strand=Plus/Minus Query 301351 TCATTGGGGAAAGGCCTCGCTGCTGCGAGTATCGCCAGTTTACTAGAGAGGCGATGCTTA 301410 |||||||| ||||| ||||||||||| | | ||| || ||| || || || Sbjct 1707472 TCATTGGGCAAAGGTATCGCTGCTGCGTCCTTGGGTGCTTTGCTTGAGGCTCGGGGCCTA 1707413 Query 301411 AAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCG 301470 || | | || || || | || |||||| | || || || ||||| || |||||||| Sbjct 1707412 AATGTCACCATCCTGAAGCTCGATCCCTATTTGAATGTTGACCCGGGCACCATGAGCCCA 1707353 Query 301471 ACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGG 301530 ||| ||||| ||||| || || || |||||||| || || || ||||| ||| ||||| Sbjct 1707352 TTTCAGCATGGTGAAGTATTTGTCACCGATGATGGGGCCGAGACTGATCTTGATTTGGGG 1707293 Query 301531 CACTACGAACGTTTCACTTC---ATTAACCCT-TAAGCGTGAAAGTAATTTTACGACTGG 301586 |||||||| || ||| || | || || | | |||||| | |||||| |||||||| Sbjct 1707292 CACTACGAGCGGTTC-CTGCGCAATAAAACGTCAAAGCGT---AATAATTTCACGACTGG 1707237 Query 301587 CCAAGTTTATTTAAAAGTTAT--CGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACG 301644 ||| || || | | | ||| || | | |||||| || ||||||||| ||| Sbjct 1707236 CCAGGTATA-CGAGACGATATTGCGCAGA-GAACGCCGCGGCGACTATCTCGGCGGCACG 1707179 Query 301645 GTGCAAGTTGTTCCCCACATCACCGATGAAATCAAAAGAAGAATTCACATTGCGGC--TG 301702 || || || |||| || | || ||||| |||||| | | || | | ||||| || Sbjct 1707178 GTACAGGTCATTCCGCATGTTACTGATGAGATCAAATCACGCATCCTC--CGCGGCGGTG 1707121 Query 301703 AAAAATCAGATATACTTATTGGAGAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTC 301762 || | || || |||| ||||| || ||||| ||||| ||||||||||| | | Sbjct 1707120 AAGGCTGTGACATCGCGATTGCTGAAATCGGTGGAACCGTCGGCGATATCGAATCCCAGC 1707061 Query 301763 CTTTTATAGAAGCGATTCGTCAACT 301787 | ||| | ||||| |||| || || Sbjct 1707060 CGTTTTTGGAAGCTGTTCGGCAGCT 1707036 Score = 125 bits (138), Expect = 1e-23 Identities = 279/409 (68%), Gaps = 10/409 (2%) Strand=Plus/Minus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 |||||| || || || ||| | || || |||||||| || ||||||| || | || Sbjct 2522137 CCAAGCTTCCACCTCAGAGCTTTATGGTTTAGTTCAGGAAATCCCTCAAAGGGAGACCAC 2522078 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 |||||||| || || || |||| || || ||| | |||||||||||||| | Sbjct 2522077 GCCGTTTTACCCAAGGTCGCCTTATGCGGTTGCAAAGATGTATGCCTATTGGATAGCTGT 2522018 Query 44103 AAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAG 44162 ||||||||||| | ||||| |||| || ||||||| |||| || ||||||| || Sbjct 2522017 GAATTATCGCGAAGCTTATGGCATGTACGCTTGTAATGGTATTTTGTTTAATCACG--AG 2521960 Query 44163 TCCCAAC--AGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATT 44220 |||| || | || | || || ||||||||||| || || | || |||||| Sbjct 2521959 TCCCCACGTCGCGGAGAAACTTTTGTCACTCGTAAAATTACCCGTGCCATAGCAAATATT 2521900 Query 44221 -TTCAACGGGACAGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGG 44279 |||| || | || ||| | ||||| ||||| || ||| | ||||||||||| Sbjct 2521899 GCTCAA-GGTATCGAGCCTTGCCTTTATCTCGGAAATATGGACGCGCTCAGAGATTGGGG 2521841 Query 44280 ATATGCCTTGGATTATGT-AGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGACG 44338 | || |||||||| | | || |||| |||||||||| || || || | || | Sbjct 2521840 GCACGCAAAAGATTATGTGCGCATGCA-GTGGATGATGTTGCAGCAGGATAGCCCTGAAG 2521782 Query 44339 ACTACGTTATTGCAACTGGAAAGACGACGA-GTGTCCGTGACTTTGTAA 44386 | | |||||||| || || || || | | ||| || || ||||||| Sbjct 2521781 ATTTTGTTATTGCCACGGGCAA-ACAAATATCTGTTCGCGAATTTGTAA 2521734 >seq3 Length=4400433 Score = 143 bits (158), Expect = 6e-29 Identities = 263/383 (69%), Gaps = 2/383 (1%) Strand=Plus/Plus Query 43979 TTTGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAA 44038 ||| ||| || || || || || |||||||| |||||||| | || || || | Sbjct 3198948 TTTACCAGGCCTCTACGTCTGAATTGTACGGTTTAGTTCAGGAAACACCGCAGCGCGAGA 3199007 Query 44039 GGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTT 44098 || || |||||||| | || ||||| ||||| ||||| || || || |||||||| Sbjct 3199008 CAACACCTTTTTATCCGAGAAGCCCATACGGTGTCGCGAAACTCTACGCTTATTGGATAA 3199067 Query 44099 GTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACG 44158 | || || ||||||||||| ||||||| || ||||| ||| |||||||||| Sbjct 3199068 CTGTTAACTACCGCGAGTCGTACGGGATGTACGCCTGTAACGGTATTCTGTTCAATCACG 3199127 Query 44159 AAAGTCCCAACAGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATA 44218 |||| || | ||| | ||||||||||| || |||||| || | || |||| Sbjct 3199128 AAAGCCCTCGTCGGGGTGAGACATTCGTGACTCGCAAGATCACGCGCGCACTCGCCAATA 3199187 Query 44219 TTTTCAACGGGACAGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGG 44278 | | | ||| || | ||| ||||||| || ||||| || | ||||||||| Sbjct 3199188 TAGCCCAGGGGCTTGAGGAGTGCTTGTATCTGGGGAACATGGATGCGTTGCGAGATTGGG 3199247 Query 44279 GATATGCCTTGGATTATG-TAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGAC 44337 | |||| |||||||| | | | || ||| ||||| |||| |||||| | | || Sbjct 3199248 GGCATGCTAAGGATTATGTTCGCATGCA-ATGGATGATGCTGCAGCAAGACGAGGCGGAA 3199306 Query 44338 GACTACGTTATTGCAACTGGAAA 44360 |||| ||| ||||| ||||| || Sbjct 3199307 GACTTCGTAATTGCGACTGGCAA 3199329 Score = 122 bits (134), Expect = 2e-22 Identities = 183/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485 ||| ||||||||||| |||| ||||| || ||||||||||||||| || ||||| ||| Sbjct 3818663 AAATTGGACCCCTATCTCAATGTCGACCCAGGGACGATGAGCCCGCGCCAGCATGGCGAA 3818604 Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 ||||| ||||| |||||||| || || || ||| |||| || || ||||| || || Sbjct 3818603 GTGTTTGTGACCGATGATGGGGCAGAGACAGATTTGGACCTTGGCCACTATGAGCG---- 3818548 Query 301546 ACTTCATTAACCCTTAAGCGTGAAAGT-----AATTTTACGACTGGCCAAGTTTATTTAA 301600 ||| | | | | ||| | ||| ||| | ||||| |||| | |||| | Sbjct 3818547 -CTTTACTGGCGTCTCGGCGCGCCAGTCCGACAATATCACGACCGGCCGGATCTATTCGA 3818489 Query 301601 AAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCC 301660 |||||||||| || ||| || |||||||| ||| | ||||| |||| | Sbjct 3818488 CGATTATCGAAAAAGAGCGCCGCGGGGATTATCTCGGTGCGACCATCCAAGTCATTCCGC 3818429 Query 301661 ACATCACCGATGAAATCAAA 301680 || ||||| |||| |||||| Sbjct 3818428 ACGTCACCAATGAGATCAAA 3818409 >seq63 Length=566113 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| | || || || || | || || || |||||||||||||| Sbjct 328821 CCACCACGCAGCCTCAGCACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 328880 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || || || ||||||| || || ||||| || Sbjct 328881 AGGGTGCGGCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 328940 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| ||||| ||||| || | ||| || Sbjct 328941 ATGCCCTCCTTGTCCTGGATCTTCGGCTTCACGCCGTCGATCGTGTCGGAGGGTTCTACG 329000 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 329001 TCAAGCGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATCTGCAT 329047 Score = 127 bits (140), Expect = 4e-24 Identities = 142/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||| |||||||| || |||||||| ||||| || || || ||||| |||||| Sbjct 329443 TTTTGGATATTGTAGTCGCTCAGGGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATC 329502 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | || || ||||| || || ||||||||||| |||||||| ||| || ||| || Sbjct 329503 AGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTATGC-TTCACGCCGTC 329561 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| | || || || || |||| ||||| ||||| | |||||| || || Sbjct 329562 GATCGTGTCCGAGGGCTCCACGTCAAGGGTGACGGTCTTGCCCGTGAGAGTCTTGACAAA 329621 Query 283091 TATCTGC 283097 |||||| Sbjct 329622 GATCTGC 329628 >seq1 Length=7344524 Score = 109 bits (120), Expect = 1e-18 Identities = 173/242 (71%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 301442 TCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC-GTGACGGAT 301500 |||| |||||||| || || | | ||| | | |||||||| ||||| ||||| || Sbjct 1933942 TCAATGTCGATCCAGGCACACTCAACCCCTATGAGCATGGAGA-GTGTTTTGTGACTGAC 1934000 Query 301501 GATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACTTCA--TTAACCC 301558 || ||||| ||||| ||||| |||||||| |||||||| |||||| || | || | | Sbjct 1934001 GACGGTGCCGAAACGGATCTTGATCTGGGTCACTACGAGCGTTTC-CTGAACGTTCCCAC 1934059 Query 301559 TTAAGCGTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAAAGTTATCGAAAATGAAC 301618 || | | | | |||| | || || || | ||||| || || ||| | || |||| Sbjct 1934060 TTCA-CAAGCCAATAATGTGACTACCGGTCGCATTTATCAAACGGTCATCAATAAAGAAC 1934118 Query 301619 GCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACATCACCGATGAAATCA 301678 ||| ||| || |||||||||||| || ||| |||| ||||||||||| || || | Sbjct 1934119 GCGCCGGTGATTACGACGGAAAGACGGTACAGGTTATTCCTCACATCACCGACGAGATTA 1934178 Query 301679 AA 301680 || Sbjct 1934179 AA 1934180 Score = 95.1 bits (104), Expect = 3e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 149713 TTTTTGCTTCGTAAAATTTACGGATGAGCGCTGGGAAAACATGACCGTTTTCGAGATCGT 149772 |||| || | || ||||||||| || || ||||| | ||| || | | | ||| | Sbjct 6544415 TTTTGGCATGGTGAAATTTACGAATCAGAGCTGGTAGAACGTGGGAAGTCTTTAAATCAT 6544356 Query 149773 ATCGATCATTCGGCCCGCTTAGGTTCGTGGGCATCGCCGAGACGAAGTTGCATCCGAATT 149832 | |||||| |||||| || || || ||||| ||||| | ||| || || | ||| Sbjct 6544355 AATTATCATTGGGCCCGTATAAATTGGTAGGCATAGCCGAAATGAAATTACAATTGTATT 6544296 Query 149833 GCTTTCTATAGGCATCGCACATCTCTATCCCCGCAATTTTTGCGATCGCGTATGGTTTGT 149892 | | || ||| || || || | || ||||| |||||||||||||| ||||| || | | Sbjct 6544295 GATCTCGATAAGCGTCACAAAGCTTAATCCCGGCAATTTTTGCGATGGCGTAAGGCTCAT 6544236 Query 149893 TCGTGGGTTCGAG-AGGCCCAGACATAAGATATTCTTCCTT 149932 | || ||||| || | |||| | || | |||||| ||||| Sbjct 6544235 TGGTAGGTTCCAGCAAGCCC-GTCAGCAAATATTCCTCCTT 6544196 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 36951 CCGGTTGCTTTTGAGGGAGCACTGAAGCTCAAAGAAATCTCTTACATTCACGCGGAGGGC 37010 |||||||| || || || ||| ||||||||||||| || || ||||| ||||| || ||| Sbjct 4509954 CCGGTTGCATTGGAAGGTGCATTGAAGCTCAAAGAGATTTCCTACATCCACGCCGAAGGC 4509895 Query 37011 TTCCTGGGAGGTGAGTTAAAACACGGTCCTCTTGCTCTTCTCGATGACAAGATTCCTGTC 37070 | | || || ||| | |||||||| || |||| || |||| || || || || ||| Sbjct 4509894 TATCCGGCAGCTGAAATGAAACACGGGCCAATTGCGCTCATCGACGAAAATATGCCGGTC 4509835 Query 37071 ATCGT 37075 || || Sbjct 4509834 ATTGT 4509830 >seq2 Length=6328565 Score = 100 bits (110), Expect = 6e-16 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 301425 TAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGA 301484 |||| | || |||||| |||| ||||||||||| |||||||||||| ||| || || | Sbjct 3180836 TAAACTCGATCCCTATCTCAATGTCGATCCGGGCACGATGAGCCCGTATCAGCACGGCG- 3180778 Query 301485 AGTG-TTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTT 301543 |||| || || || || || ||||| || ||||| |||||||| || ||||| || || | Sbjct 3180777 AGTGTTTTGTAACCGACGACGGTGCAGAGACCGACCTGGATCTCGGTCACTATGAGCGGT 3180718 Query 301544 TCAC 301547 |||| Sbjct 3180717 TCAC 3180714 >seq6 Length=3173221 Score = 98.7 bits (108), Expect = 2e-15 Identities = 315/481 (65%), Gaps = 16/481 (3%) Strand=Plus/Minus Query 301430 TGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGT 301489 ||||||| || |||||||| || || || || ||||||||| || || || || || | Sbjct 3143745 TGGACCCGTACATCAACGTGGACCCCGGCACCATGAGCCCGTTCCAGCACGGTGAGGTTT 3143686 Query 301490 TCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACTT 301549 | || || || ||||| || ||||| || ||||||||||| ||||| || || |||| | Sbjct 3143685 TTGTCACCGAGGATGGCGCGGAAACAGACCTGGATCTGGGCCACTATGAGCGCTTCA-TC 3143627 Query 301550 CATTAACCCTTAAGC--GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAAAGTTAT 301607 | || | | ||| | | || ||| || || || |||| || || | | || || Sbjct 3143626 CGTTCCCGGATGAGCAAGCGTAA-TAACTTCACCACCGGCCGGGTGTACGAAGAGGTGAT 3143568 Query 301608 CGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACATCAC 301667 | || || ||| || ||| || || || || || || |||| |||||||| Sbjct 3143567 CCGCAAGGAGCGCCGTGGCGACTACCTGGGCGGAACCGTCCAGGTGATTCCTCACATCAC 3143508 Query 301668 CGATGAAATCAAAAGAAGAATTCACATTGCGGCTGAAAAATCAGATAT---ACTTATTGG 301724 || || ||||| | | || | ||||| | || | ||| || Sbjct 3143507 TGACGAGATCAAGCGTCGGGTTGTTGAAGGGGCTGCCGGCGCTGACGTGGCACTGAT--- 3143451 Query 301725 AGAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAGCGATTCGTCA 301784 ||||| || || ||||| || ||||||||||| || || || | ||||| ||||| Sbjct 3143450 CGAAATCGGTGGTACGGTTGGCGATATCGAATCTCTGCCGTTCCTGGAAGCCTGCCGTCA 3143391 Query 301785 ACTCTCTCATGACGAAG-GAACGGCCA--ATGTTCTGTTCATTCATCTCGTGCTCTTACC 301841 ||| | | ||||| | ||| || ||||||||| || || || | || Sbjct 3143390 GCTC---AAGGTCGAAGTGGGTTCCCAGCGTGCTCTGTTCATGCACCTGACACTGGTTCC 3143334 Query 301842 CTATATAGCGACTGCTGGTGAGTTGAAATCAAAGCCAGCACAGCATTCGGTTAAAGAATT 301901 ||||| ||||| || |||||| | || | |||||| | |||||||| || || ||| | Sbjct 3143333 GTATATTGCGACGGCCGGTGAGATCAAGACCAAGCCAACCCAGCATTCCGTCAAGGAAAT 3143274 Query 301902 G 301902 | Sbjct 3143273 G 3143273 >seq58 Length=603131 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 282917 GATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACG 282976 |||| || |||| | |||||||| |||| ||||| | |||| ||||| | || Sbjct 10745 GATGCTGCAGTCCGACAGCGTGCGAAAGCCCTCCAGTTGACTGCCGGTGAAGATGAGGCG 10686 Query 282977 TTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGT 283036 || ||||| ||| ||||||||||||| |||||||| || ||| ||||| || Sbjct 10685 CTGCTGGTCGGGCGGGATACCCTCCTTGTTCTGGATCTTCCGCTTCACGTCGTCGATCGT 10626 Query 283037 GTCCGA-AGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCT 283095 ||||| ||||| || || || ||||| ||||| || || |||||| ||||| |||| Sbjct 10625 ATCCGACGGCTTC-ACGTCCAGGGTGATGGTCTTTCCAGTGTGAGTCTTGACGAAAATCT 10567 Query 283096 GCAT 283099 |||| Sbjct 10566 GCAT 10563 >seq452 Length=65161 Score = 93.3 bits (102), Expect = 9e-14 Identities = 237/356 (67%), Gaps = 6/356 (2%) Strand=Plus/Plus Query 43975 CGGATTTGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACA 44034 ||| | | ||| || ||||| |||||| | ||||| |||| |||||| | || || Sbjct 49550 CGGTTCTACCAGGCCTCGACCTCGGAGCTTTACGGTCAGGTGCAGGAGGTCCCGCAGCGC 49609 Query 44035 GAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGG 44094 |||| ||| || || || ||||| || |||| ||||| ||||| |||||||||||| Sbjct 49610 GAAACGACGCCTTTCTACCCCCGCTCGCCCTATGCCGTGGCCAAGCTCTATGCCTATTGG 49669 Query 44095 ATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAAT 44154 || || || || |||||| | |||||||| | | || || || |||||| Sbjct 49670 ATCTGCGTGAACTACCGCGAGGCCTATGGGATCTATGCCTGCAACGGCATCCTCTTCAAT 49729 Query 44155 CACGAAAGTCCCAA--CAGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTG 44212 |||||||| | || | | || | |||||||| || || ||||| || | | Sbjct 49730 CACGAAAG--CGAACGCCGCGGCGAGACCTTCGTGACCCGCAAGATCACCCGAGGCCTGG 49787 Query 44213 CGAATATTTTCAACGGGACAGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAG 44272 |||| || | | || ||| | ||| |||| || || ||||| ||| | | | Sbjct 49788 CGAACATCAGCCAGGGCCTGGAAGACTGCCTGTACCTGGGCAACATGGACGCCCTGCGCG 49847 Query 44273 ATTGGGGATATGCCTTGGATTATGT-AGAAGCCATGTGGCTGATGTTGCAACAAGA 44327 | ||||| |||| || ||||| | | || |||||||||| |||| || || Sbjct 49848 ACTGGGGTCATGCGCGTGACTATGTCCGCATGCA-GTGGCTGATGCTGCAGCAGGA 49902 >seq426 Length=76046 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43975 CGGATTTGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACA 44034 ||| ||| || |||||||| || ||| | || || ||||| ||||| || || || | Sbjct 32281 CGGTTTTATCAGGCGTCGACCTCTGAGCTTTATGGCAAGGTGCAGGAAATCCCCCAGAGT 32340 Query 44035 GAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGG 44094 |||| || |||||| | || || || |||| ||||| ||| | |||||||||||| Sbjct 32341 GAAACCACGCCGTTTCACCCGCGTTCGCCCTATGCGGTGGCCAAGATGTATGCCTATTGG 32400 Query 44095 ATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAAT 44154 || ||||||||||| |||||||||| | || || || |||||| Sbjct 32401 ATCACGGTGAATTATCGCGAAAGCTATGGGATGTATGCCTGCAACGGCATCCTGTTCAAT 32460 Query 44155 CACGAAAGTCC 44165 |||||||| || Sbjct 32461 CACGAAAGCCC 32471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046729382894728