Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 159 4e-34 >seq1 Length=3745584 Score = 159 bits (176), Expect = 4e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 || ||||| | |||| ||| |||||||| || || || || ||||||||| | |||| Sbjct 1938116 GTGAGCAGCGCGTAGGAGGCGATGTTGAACGGAACGCCGAGGCCCATGTCCGCGCTGCGC 1938057 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 ||||||| ||||||||| |||||||| | ||||||||||||||||| | | |||||| Sbjct 1938056 TGGTACATCTGGCAGGACAGCTCCCCCTCGGCCACGTAGAACTGGCAGAACATGTGGCAC 1937997 Query 145897 GGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTG 145956 |||||||||||||| | |||||||| |||||||| || | ||| |||| |||| | Sbjct 1937996 GGCGGCAGGGCCATCTTGCCGAGGTCCGCGGGGTTCCACGCCGAGAGAACGATTCTCCGG 1937937 Query 145957 CTCTCGGGGTT 145967 ||||||||| Sbjct 1937936 TCCTCGGGGTT 1937926 Score = 113 bits (124), Expect = 5e-20 Identities = 183/263 (70%), Gaps = 3/263 (1%) Strand=Plus/Minus Query 146125 AGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTG 146184 ||||| |||| ||||||||| |||||||||| | || |||| | |||| | || Sbjct 1936330 AGGAACTCCCTCGACCCGTTGCCGTCCCAGATGTGGATCCCCCGTTCCTTGAGCACGTTC 1936271 Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACC 146244 | || || |||| || |||||| |||||||| || || || | |||||| || Sbjct 1936270 GCGTTTGTACACCCAGCGACGAACCACAGCAGCTCCTCCGCCACGCCGCGCCAGAACACG 1936211 Query 146245 CTCTTGGTGGTCAGCAGGGGGAA---CTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCG 146301 | ||||||||||||||| ||||| || ||| ||| | | ||| | ||| Sbjct 1936210 CGCTTGGTGGTCAGCAGCGGGAACCGCTCTTCCCTGAGGCTGAAGCGCATCTGCACGCCG 1936151 Query 146302 AAGACGGACAGGGTGCCCACGCCCGTCCTGTCCCCCCTGCGCACCCCGTTCGCCAGGATC 146361 || |||||| || ||| ||||| | |||||||||||| || ||||| ||||||| Sbjct 1936150 AACTTGGACAGCGTCCCCGTCCCCGTGCGGTCCCCCCTGCGGACGCCGTTGTCCAGGATG 1936091 Query 146362 TCCCTGACGGTGTTGAGGTACTG 146384 ||| || |||||||||||| Sbjct 1936090 TCCTCCACCAGGTTGAGGTACTG 1936068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590067432530800