Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1 161 8e-35 >seq1 Length=3745584 Score = 161 bits (178), Expect = 8e-35 Identities = 149/189 (79%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 21017 CGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCT 21076 ||| || || |||||| ||||||||| ||||| || |||||||||||||| ||| | Sbjct 1938117 CGTGAGCAGCGCGTAGGAGGCGATGTTGAACGGAACGCCGAGGCCCATGTCCGCGCTGCG 1938058 Query 21077 CTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACA 21136 |||||||| ||||||||||||||||||| |||||||| ||||| || || | ||| || Sbjct 1938057 CTGGTACATCTGGCAGGACAGCTCCCCCTCGGCCACGTAGAACTGGCAGAACATGTGGCA 1937998 Query 21137 AGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCG 21196 || || || |||||| |||||||||||||||||||||| | | |||||| | ||| Sbjct 1937997 CGGCGGCAGGGCCATCTTGCCGAGGTCCGCGGGGTTCCACGCCGAGAGAACGATTCTCCG 1937938 Query 21197 ATCGTGGGG 21205 || | ||| Sbjct 1937937 GTCCTCGGG 1937929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 ||||||||||| || | ||| ||||| ||||| || |||||||||| |||||| Sbjct 1937435 AGCTGGTCCACTCCTTTCCCCGTGTAGTCGGCGTGCATGTCCGTGTACTCCGCGCCAAAA 1937376 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTC 21337 || ||||| ||||| |||||||||||||| || || || || Sbjct 1937375 TGCCTCCATTGGAAACCGTACACCGGCCCAAGGTCTCCTTC 1937335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427769378829600