Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1270 105 5e-18 >seq1270 Length=652918 Score = 105 bits (116), Expect = 5e-18 Identities = 182/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 108342 CGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CA 108400 |||| |||| | || | ||||||||| || ||||| | ||| ||||| | || || Sbjct 596739 CGGGCTCGGCATCACCGGCGGCGTCCACCGCCTGTGGGCGCACCGCTCCTACGACGCGCA 596798 Query 108401 CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCC 108460 | | | || | | |||||| || ||| | |||| |||| ||| | ||||| Sbjct 596799 CTGGTCGGTGC-GCGTGTTCATGATGCTCATCAACTCGATGGCCAACCAGGGCTCCATCT 596857 Query 108461 CGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCAC 108520 || ||| || ||| ||| | || |||||||||||||| || ||| || ||||||| Sbjct 596858 ACCACTGGTCGCGCGACCACCGCGTCCACCACAAGTACTCGGAGACGGACGCGGACCCAC 596917 Query 108521 ACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACC 108580 ||||||| || | || |||| ||| ||||| |||| |||||| ||| ||| ||| Sbjct 596918 ACAACGCGAAGCGCGGCTTCTTCTTCGCGCACATGGGCTGGCTCTACGTGAAGAAGCACC 596977 Query 108581 CCGACGTGATCTCGGCCGGTCG 108602 | || |||||| |||||| || Sbjct 596978 CGGAGGTGATCAAGGCCGGGCG 596999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381766890872880