Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq665 123 2e-23 seq8 120 2e-22 >seq665 Length=197211 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| |||||||| || | || | || |||||||| || || || || || Sbjct 104651 TTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATC 104592 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || ||||||||||| | || | ||||||||||| |||||||| || ||| | Sbjct 104591 AGACGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 104532 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 |||| ||| | ||| || |||| ||| ||||| || |||||||| ||||| |||||| Sbjct 104531 ATCGTGTCAGAAGGCTCGACGTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAAG 104472 Query 34974 ATCTGCATATT 34984 ||||||| ||| Sbjct 104471 ATCTGCAGATT 104461 Score = 114 bits (126), Expect = 8e-21 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| |||||||||||| | || | || |||||||| || ||||| || || Sbjct 105321 TTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 105262 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| |||||||| || ||| | Sbjct 105261 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 105202 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 |||| || | ||| || |||| || || || || |||||||| ||||| || ||| Sbjct 105201 ATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAG 105142 Query 34974 ATCTGCAT 34981 |||||||| Sbjct 105141 ATCTGCAT 105134 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || |||||||| || ||||| || Sbjct 106054 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 105995 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 105994 ATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 105935 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||| ||||| || Sbjct 105934 TCGATCGTGTCGGATGGCTCCACGTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACG 105875 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 105874 AAGATCTGCAT 105864 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || |||||||| || ||||| || Sbjct 107081 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 107022 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 107021 ATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 106962 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||| ||||| || Sbjct 106961 TCGATCGTGTCGGATGGCTCCACGTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACG 106902 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 106901 AAGATCTGCAT 106891 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || |||||||| || ||||| || Sbjct 107309 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 107250 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 107249 ATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 107190 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||| ||||| || Sbjct 107189 TCGATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACG 107130 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 107129 AAGATCTGCAT 107119 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || || ||||| ||||| |||||||| ||| | || | || ||| Sbjct 106871 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 106812 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 106811 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 106752 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||||| || ||| | |||| || | ||| || |||| || || || || Sbjct 106751 ATCTTCTGCTTCACGCCGTCGATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGTCTTG 106692 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| ||||| || ||||||||||| Sbjct 106691 CCCGTGAGGGTCTTGACGAAGATCTGCAT 106663 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 107537 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 107478 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 107477 ATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 107418 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||| ||||| || Sbjct 107417 TCGATCGTGTCGGATGGCTCCACGTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACG 107358 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 107357 AAGATCTGCAT 107347 Score = 109 bits (120), Expect = 4e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || || Sbjct 106279 TTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 106220 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| |||||||| || ||| | Sbjct 106219 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 106160 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 |||| || | ||| || |||| || || || || |||||||| ||||| || ||| Sbjct 106159 ATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAG 106100 Query 34974 ATCTGCAT 34981 |||||||| Sbjct 106099 ATCTGCAT 106092 >seq8 Length=4529048 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || |||||||| Sbjct 421135 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 421076 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 421075 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 421016 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 421015 TCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 420956 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 420955 AAGATCTGCAT 420945 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 418876 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 418817 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 418816 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 418757 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 418756 TCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTCTTACCCGTGAGGGTCTTGACG 418697 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 418696 AAGATCTGCAT 418686 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 419104 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 419045 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 419044 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 418985 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 418984 TCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTCTTACCCGTGAGGGTCTTGACG 418925 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 418924 AAGATCTGCAT 418914 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 420451 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 420392 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 420391 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 420332 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 420331 TCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTCTTACCCGTGAGGGTCTTGACG 420272 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 420271 AAGATCTGCAT 420261 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 420679 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 420620 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 420619 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 420560 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 420559 TCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTCTTACCCGTGAGGGTCTTGACG 420500 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 420499 AAGATCTGCAT 420489 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 420907 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 420848 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 420847 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCG 420788 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 420787 TCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTCTTACCCGTGAGGGTCTTGACG 420728 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 420727 AAGATCTGCAT 420717 Score = 109 bits (120), Expect = 4e-19 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 419333 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 419274 Query 34851 ATTAGTC-GTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | | |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 419273 ATCAGGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCC 419214 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 419213 GTCGATCGTGTCCGAAGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 419154 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 419153 GAAGATCTGCAT 419142 Score = 109 bits (120), Expect = 4e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || || Sbjct 419558 TTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 419499 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 | || |||||||| | || | ||||||||||| |||||||| || ||| | Sbjct 419498 AAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 419439 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 |||| || | ||| || || | ||| ||||| || |||||||| ||||| || ||| Sbjct 419438 ATCGTGTCCGAAGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 419379 Query 34974 ATCTGCAT 34981 |||||||| Sbjct 419378 ATCTGCAT 419371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628575280560