Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq475 93.3 8e-14 seq23 87.8 3e-12 >seq475 Length=407929 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 213471 ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTG 213530 || |||| ||||| | | |||| | |||||||| || |||||||| | ||| ||| Sbjct 61082 ACGAACTTGGGCAGTACCACGCTGCCGAGGTTGCAGACCGCCACCTCGCCGGGGTCCGTG 61141 Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 ||||||| |||||| |||||||||||| | | ||||||| ||||||| || |||||| Sbjct 61142 TACTCCACGATCTCCGTGCACAGGTTGGAGGACTGGATGGTCCCCAGGTGCTTGTGGTT 61200 >seq23 Length=3983565 Score = 87.8 bits (96), Expect = 3e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||| ||||||| | |||||||||||| ||||| ||||| ||||| ||| |||||||| Sbjct 2104479 GTGAAGGGCTCAACGCTCTCGTTGTTGCCCAGGATCTGGGCAGTAGAGGCGGTGGGCATC 2104538 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCG 213056 || |||||||| || |||||| | ||||||||| Sbjct 2104539 GGCGCCACCAGCAGGGAGTTCCTGAGGCCGTGCTCG 2104574 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| |||||| ||||| |||||| | | ||||||||||||||||| ||| Sbjct 2106585 GTGTACTCCACGATCTCCGTGCAGAGGTTGGAGGACTTGATGGTGCCCAGGTTCTTCTGG 2106644 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 || ||| |||| | |||||||| |||||||| |||| || ||||| | ||| Sbjct 2106645 TTGCTCTTGAAGTTGCACGCGTCCTTGTACAGCATGTAAGGGGTGCCTGTCTCCACCTG 2106703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931518011916800