Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 168 8e-37 >seq1 Length=3745584 Score = 168 bits (186), Expect = 8e-37 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 147013 GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTC 147072 |||||||||| |||| ||| |||||||| || || || |||||||||||| | | | Sbjct 1938116 GTGAGCAGCGCGTAGGAGGCGATGTTGAACGGAACGCCGAGGCCCATGTCCGCGCTGCGC 1938057 Query 147073 TGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCAC 147132 ||||||| |||||| || |||||||| ||||||||||| |||||||| | ||||||||| Sbjct 1938056 TGGTACATCTGGCAGGACAGCTCCCCCTCGGCCACGTAGAACTGGCAGAACATGTGGCAC 1937997 Query 147133 GGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG 147192 |||||||| ||||| | ||||||||||||||||| ||||||| || | | || | Sbjct 1937996 GGCGGCAGGGCCATCTTGCCGAGGTCCGCGGGGTTCCACGCCGAGAGAACGATTCTCCGG 1937937 Query 147193 CTCTCGGGGTT 147203 ||||||||| Sbjct 1937936 TCCTCGGGGTT 1937926 Score = 91.5 bits (100), Expect = 2e-13 Identities = 171/251 (68%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 147373 GACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAG 147432 ||||||| | ||||||||||| | ||| | |||| | || | || || | Sbjct 1936318 GACCCGTTGCCGTCCCAGATGTGGATCCCCCGTTCCTTGAGCACGTTCGCGTTTGTACAC 1936259 Query 147433 CCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTC 147492 || || |||||| |||||||||||| || || | ||| || || | |||||||||| Sbjct 1936258 CCAGCGACGAACCACAGCAGCTCCTCCGCCACGCCGCGCCAGAACACGCGCTTGGTGGTC 1936199 Query 147493 AGCAGGGGGAA---CTGGTCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGC 147549 ||||| ||||| || ||||| || | | | ||| | || ||| |||||| Sbjct 1936198 AGCAGCGGGAACCGCTCTTCCCTGAGGCTGAAGCGCATCTGCACGCCGAACTTGGACAGC 1936139 Query 147550 GTGCCCGTGCCCGTCCTGTCCTCCCTGCGCGTCCCGTTCTCCAAAATCTCCCTGACGGTG 147609 || ||||| ||||| | |||| ||||||| ||||| |||| || ||| || | Sbjct 1936138 GTCCCCGTCCCCGTGCGGTCCCCCCTGCGGACGCCGTTGTCCAGGATGTCCTCCACCAGG 1936079 Query 147610 TTGAGGTACTG 147620 ||||||||||| Sbjct 1936078 TTGAGGTACTG 1936068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583478737128000