Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=3745584 Score = 98.7 bits (108), Expect = 8e-16 Identities = 166/238 (70%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 30092 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAG 30151 || || || || |||||| |||||||||| | | |||| || |||| | || | | Sbjct 1936327 AACTCCCTCGACCCGTTGCCGTCCCAGATGTGGATCCCCCGTTCCTTGAGCACGTTCGCG 1936268 Query 30152 TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30211 ||||| |||| |||||||||||||||||||||| | ||| | ||| || || | | Sbjct 1936267 TTTGTACACCCAGCGACGAACCACAGCAGCTCCTCCGCCACGCCGCGCCAGAACACGCGC 1936208 Query 30212 TTGGTCGTGAGGAG-GGGAA--ACTGTCCCTTGAGGCCGTACCTCGCCTGAGACCCAAAC 30268 ||||| || || || ||||| || | || |||||| | | | | ||| || ||| Sbjct 1936207 TTGGTGGTCAGCAGCGGGAACCGCTCTTCCCTGAGGCTGAAGCGCATCTGCACGCCGAAC 1936148 Query 30269 ATGGACAAGACTCCCGTGCCTGTCCTGTCTCCCCTGCGTTTGCCGTTTTCCACGACGT 30326 |||||| ||||| || || | ||| |||||||| |||||| |||| || || Sbjct 1936147 TTGGACAGCGTCCCCGTCCCCGTGCGGTCCCCCCTGCGGACGCCGTTGTCCAGGATGT 1936090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406156913355220