Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq1 122 5e-23 >seq1 Length=3745584 Score = 122 bits (134), Expect = 5e-23 Identities = 128/166 (77%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 1175 TCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTC 1234 || || |||||| || |||||| || | ||||| || | ||||||||||| | | | Sbjct 1937953 TCGGCGTGGAACCCCGCGGACCTCGGCAAGATGGCCCTGCCGCCGTGCCACATGTTCTGC 1938012 Query 1235 CAGCTGTACGTCGTCGACGGCCGGCTCTCGCTG-CAGGTCTACCAGCGCAGCGCGGACAT 1293 ||| | ||||| | ||| || ||| || ||| ||| | |||||||||||||||||||| Sbjct 1938013 CAGTTCTACGTGGCCGAGGGGGAGCTGTC-CTGCCAGATGTACCAGCGCAGCGCGGACAT 1938071 Query 1294 GTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCG 1339 | |||||| || |||||||| |||||||| |||||||| ||| || Sbjct 1938072 GGGCCTCGGCGTTCCGTTCAACATCGCCTCCTACGCGCTGCTCACG 1938117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296126616444270