Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq665 118 2e-21 seq8 111 4e-19 >seq665 Length=197211 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || ||||| || ||||| || ||||||||||| || | | || | || || Sbjct 106875 GAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTC 106816 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 106815 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 106756 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| ||| ||| || || ||||| || || Sbjct 106755 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGT 106696 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 106695 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 106663 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || ||||| || ||||||||||| || | | || | || || Sbjct 107559 GAGGACAAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTC 107500 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 107499 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 107440 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| || ||| || || ||||| || || Sbjct 107439 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCGGATGGCTCCACGTCGAGAGTGATCGT 107380 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 107379 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 107347 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 107331 GAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 107272 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 107271 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 107212 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| ||| ||| || || ||||| || || Sbjct 107211 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGT 107152 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 107151 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 107119 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 106076 GAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 106017 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 106016 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 105957 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| || ||| || || ||||| || || Sbjct 105956 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCGGATGGCTCCACGTCGAGAGTGATCGT 105897 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 105896 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 105864 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 107103 GAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 107044 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 107043 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 106984 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| || ||| || || ||||| || || Sbjct 106983 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCGGATGGCTCCACGTCGAGAGTGATCGT 106924 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 106923 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 106891 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| || | | || | || || || || || ||||||||||| Sbjct 106279 TTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 106220 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | ||| || ||||| || || || || || || || || Sbjct 106219 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 106160 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||| ||| ||| || || ||||| || || ||||||||||| ||||| |||||| Sbjct 106159 ATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAG 106100 Query 152097 ACCTGCAT 152104 | |||||| Sbjct 106099 ATCTGCAT 106092 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| || | | || | || || || || || ||||||||||| Sbjct 105321 TTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 105262 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | ||| || ||||| || || || || || || || || Sbjct 105261 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 105202 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||| ||| ||| || || ||||| || || || |||||||| ||||| |||||| Sbjct 105201 ATCGTGTCGGAAGGCTCCACGTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAG 105142 Query 152097 ACCTGCAT 152104 | |||||| Sbjct 105141 ATCTGCAT 105134 >seq8 Length=4529048 Score = 111 bits (122), Expect = 4e-19 Identities = 153/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || | | || | || || Sbjct 419354 AGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 419295 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAG-CCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || || ||||||||||| | ||| || ||||| || Sbjct 419294 TCCAGCTGCTTGCCGGCGAAGATCAGGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 419235 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| ||| ||| || || || || || || Sbjct 419234 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGAAGGCTCCACGTCCAGGGTGATGGT 419175 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 419174 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 419142 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || |||||||| || ||||||||||| || | | || | Sbjct 420479 GAGGCGGAGCACCAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCG 420420 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||||| | ||| || || Sbjct 420419 GCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTC 420360 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || || | |||| || ||| || || || || Sbjct 420359 CTTGTCCTGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGACGGCTCCACGTCCAGGGT 420300 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||| ||||||| |||||| Sbjct 420299 GATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 420261 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || |||||||| || ||||||||||| || | | || | || || Sbjct 418898 GAGCACCAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTC 418839 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 418838 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 418779 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || || | |||| || ||| || || || || || || Sbjct 418778 CTGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGT 418719 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 418718 CTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 418686 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || | | || | || || Sbjct 419125 AGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 419066 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 419065 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 419006 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || || | |||| || ||| || || || || || || Sbjct 419005 TGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTC 418946 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 418945 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 418914 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || | | || | || || Sbjct 420700 AGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 420641 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 420640 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 420581 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || || | |||| || ||| || || || || || || Sbjct 420580 TGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTC 420521 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 420520 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 420489 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || | | || | || || Sbjct 420928 AGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 420869 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 420868 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 420809 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || || | |||| || ||| || || || || || || Sbjct 420808 TGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTC 420749 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 420748 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 420717 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || | | || | || || Sbjct 421156 AGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 421097 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||||||||||| | ||| || ||||| || Sbjct 421096 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 421037 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || || | |||| || ||| || || || || || || Sbjct 421036 TGGATCTTCTGCTTCACGCCGTCGATCGTGTCCGACGGCTCCACGTCCAGGGTGATGGTC 420977 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 420976 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 420945 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| || | | || | || || || || || ||||||||||| Sbjct 419558 TTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 419499 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||||||||||| | ||| || ||||| || || || || || || || || Sbjct 419498 AAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGCCGTCG 419439 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||| ||| ||| || || || || || || ||||||||||| ||||| |||||| Sbjct 419438 ATCGTGTCCGAAGGCTCCACGTCCAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 419379 Query 152097 ACCTGCAT 152104 | |||||| Sbjct 419378 ATCTGCAT 419371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153802025172170