Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq98 147 2e-30 seq208 91.5 2e-13 seq226 87.8 2e-12 >seq98 Length=427084 Score = 147 bits (162), Expect = 2e-30 Identities = 372/563 (66%), Gaps = 2/563 (0%) Strand=Plus/Plus Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 ||| |||||| || || || ||||| || |||||||| | || || | ||||||||||| Sbjct 135029 ACAGTAGACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAA 135088 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCG 16313 | | || ||||| || |||||||| | ||| || || ||| ||| || || | Sbjct 135089 AGCAAAGACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGG 135148 Query 16314 AAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTT 16373 ||||||| || || || || | ||||| |||| | |||||||| | | ||| | | Sbjct 135149 AAAAGAAAATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGT 135208 Query 16374 TATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTA 16433 | | ||||| | |||| | ||| || | || || ||| | ||| || | Sbjct 135209 TCGCGTCACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAA 135268 Query 16434 TGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAAC 16493 ||||| ||||| | || || || | |||| || ||||||||||||| | | Sbjct 135269 TGGCCCGCAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAG 135328 Query 16494 TGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553 || |||| ||| ||||| || | ||| || || ||||| || || || || || | Sbjct 135329 AATAGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTT 135388 Query 16554 CCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCAC 16613 ||| ||| | ||| |||| || |||| || |||||||| || ||||| Sbjct 135389 CCGGCGATTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGG 135448 Query 16614 TTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT-A 16672 || ||||| |||||||| | |||| | || | ||||| | | | ||| Sbjct 135449 ACGCGGCAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGT-TGCTCGACAAATGT 135507 Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACT 16732 | |||||||| ||||| ||| | ||| | |||||| | |||||||||| ||| | Sbjct 135508 TTCCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTTCG 135567 Query 16733 GCCTTTTTATACATTTTCCAAAT 16755 || ||||| ||||||| ||| || Sbjct 135568 GCTTTTTTGTACATTTGCCAGAT 135590 >seq208 Length=180812 Score = 91.5 bits (100), Expect = 2e-13 Identities = 367/571 (64%), Gaps = 19/571 (3%) Strand=Plus/Minus Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273 || || |||||||| || | || || ||||| || ||| || || || ||||| Sbjct 73044 CAGTGCAGTCCTTCATCGCGACTAATGAGTTCATTACTAAACGTCAAACCGGGCATCAGC 72985 Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACA 16333 ||||||||||| | ||| || || ||| ||| | ||||||||||| || || || || Sbjct 72984 CCTCGTTTCTTGAGCCAAAAGATGGCACAAAAAGCTCCCGAAAAGAAGATCCCTTCCACG 72925 Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTT---- 16389 | ||||| || | || |||||||| | | || || |||| | || | Sbjct 72924 GCCGCAAAGGCCACCAACCGTTCCGCAAAGGAGGCTTC-------CGAACCAATATACCG 72872 Query 16390 CTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG-GCCTTAAACAATT 16448 |||| |||| | ||||| | | || | | | |||| ||| ||| | | Sbjct 72871 CTGTGCCCAGGCCGCTTTCCGACGGACACTGGGTA-CTTGGGTATGCGCCGCAAAGAGTA 72813 Query 16449 TCTCTTTTTCCTGAAT--ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGA 16506 | | || | || || | | || ||||||||||| || | || ||| ||||| Sbjct 72812 CTTGTCGATC--GGATGGATTGGTAATGTACGTATCAATAAGAAGACAGTAGGTTTCTTG 72755 Query 16507 GTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTAC 16566 || ||| | || ||||| || || |||||||| || || || || |||| | || Sbjct 72754 ATGAATGCTTTCCATGGCCATTTGGAATCCATAAAAACAGCGGGCTTCCGGGACCGTCAC 72695 Query 16567 TTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAA 16626 |||| ||||||||||||||| || || ||| ||||| || ||||||| || Sbjct 72694 TTCCCGACAAAATCGTTCCGCCAAATTTTCCACCACAATACCATCGGCACCAGCAAAGAA 72635 Query 16627 CGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATG-TAAGAATATGCCAATCTTTTA 16685 ||||| | | ||||||| | |||| || | |||| || |||||||| | | Sbjct 72634 GGCCAAGACCATACTGATGAAATGTCGTTCGGATGACGTTAAGGAT-TGCCAATCGGTAA 72576 Query 16686 AATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACA 16745 ||| | | ||| | ||| || | ||||||||| |||||| | || |||| Sbjct 72575 CATCCTGACTGAGATCAATTTCGTCGGCCGTCCAAAACGAAGCCACGTGTTGCTTGTACA 72516 Query 16746 TTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | ||||| | ||| | ||| |||||||| Sbjct 72515 TGTTCCACAAATCGGCATGTTGAATGGGAAA 72485 >seq226 Length=603765 Score = 87.8 bits (96), Expect = 2e-12 Identities = 183/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGGAGTCC- 118994 |||||||||| || |||||||| || | | || | ||| || ||||| | || Sbjct 209112 TTCATGTATCTGATTTTTCCAAAAACTGGTCTTTCTTGCCACCCTTGATCGTGAATACCC 209171 Query 118995 -TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACT 119053 || |||| ||| | ||| ||| ||||||| |||||| ||||||| | | | || Sbjct 209172 ATGATACT--CCAGCCAACTCCAACGAATCCGTTAGGATCTTTTCCGTCAAGCGCATATC 209229 Query 119054 TATCGTTTAAGTAGATACAGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTA 119113 | || || ||||| || |||| ||| ||||||| | || | ||||||| || | Sbjct 209230 TGTCATTGAAGTATTGACTCGTTTTTAAAGCAATTTCCGGTGACTCAGTCCATTCAAGAA 209289 Query 119114 tttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAA 119173 | ||||| ||||||||||| | | | || ||||| ||| || | | || ||| | Sbjct 209290 TCTTTTTCGCCCAGTACATTCTCATGAAACCATGCATGCCACCTTCTCTCACCAACTGGA 209349 Query 119174 GTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204 | || || | ||||| || ||||||||| Sbjct 209350 GCTGCGCCGCATTCCAAAGTTCATCGTGTGT 209380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412514159400