Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq142 89.7 4e-13 seq67 86.0 5e-12 seq41 86.0 5e-12 >seq142 Length=241092 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || ||| ||||||| || ||||||||| || || || | Sbjct 170543 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCG 170484 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || || || || || || | ||| |||||| Sbjct 170483 GATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 170424 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| || | || || || || ||||||||||||||| ||| || ||||||||| Sbjct 170423 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAAT 170364 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| || | ||| |||| || || | ||||| || Sbjct 170363 ATTCAAAAAGAATCCACCTTGCACTTGGTTTTGCGTCTCCGAGGTGG 170317 >seq67 Length=439500 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || ||| ||||||| || ||||||||| || || || | Sbjct 3069 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCG 3010 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || || || || || || | ||| |||||| Sbjct 3009 GACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 2950 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| || | || || || || ||||||||||||||| || || ||||||||| Sbjct 2949 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAAT 2890 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || |||||||| | ||| |||| || || | ||||| || Sbjct 2889 ATTCAGAAAGAATCTACCTTGCACTTGGTTTTGCGTCTTCGAGGTGG 2843 >seq41 Length=265118 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 || || || ||| ||||||| ||||| |||||||| ||||| ||| || || | Sbjct 262952 ATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCG 262893 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || ||||| || ||| || || |||||| | || || || Sbjct 262892 GACACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAG 262833 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || ||||| || || || ||||| ||| ||| || |||||||||| Sbjct 262832 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 262773 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||| |||| | || | || || ||||| || || || Sbjct 262772 ATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGG 262726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410795323057130