Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq98 172 6e-38 seq194 141 1e-28 seq103 122 9e-23 seq208 105 7e-18 seq226 98.7 1e-15 seq120 93.3 4e-14 seq41 91.5 2e-13 seq2 89.7 5e-13 seq232 86.0 6e-12 seq82 86.0 6e-12 >seq98 Length=427084 Score = 172 bits (190), Expect = 6e-38 Identities = 384/569 (67%), Gaps = 8/569 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||| ||||| || || || ||||| | ||| || | || || Sbjct 135590 ATCTGGCAAATGTACAAAAAAGCCGAAGCTTCCTTTTGGACGGCCGAAGAAATTGATCTC 135531 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGA-CAACGAGCGCCATTTCATCAAGCA 116754 ||| || | || ||| | | ||| ||| |||||| || || || | ||| Sbjct 135530 GCCAGTGATTTGCAAGATTGGAAACATTTGT-CGAGCAACGAACGTCACTTTGTGTCGCA 135472 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGT-CGAGCGTT 116813 |||| |||| || || ||||| ||||||||| || || || ||| ||| | | || Sbjct 135471 CGTGTTGGCGTTCTTTGCCGCGTCCGACGGCATTGTGAATGAAAATTTGGCACAAAACTT 135412 Query 116814 TCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGG 116873 | | | | | | || | | || || || || || ||||| || || || ||| | | Sbjct 135411 TTGTACCGAAATT-CAATCGCCGGAAGCCCGTTGTTTTTACGGATTCCAAATTGCCGTCG 135353 Query 116874 AGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGG 116933 | ||| | ||| |||| ||||| | || || |||||| | ||| | || | | Sbjct 135352 AAAACATTCACAGCGAAACCTATTCTCTTTTGATTGATACGTACATTCGCGATCCGAAAG 135293 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||||| | ||||||| ||||| || ||| | ||||| || || |||||||| | | Sbjct 135292 AGAAGGATCATTTGTTGCGGGCCATTGATACGGTTCCGTGTGTACAAAAGAAGGCCCATT 135233 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||| ||| ||| | || | | || |||| | || ||| || ||||| | Sbjct 135232 GGGCCTTGCAATGGTGTGACGCGAACAACGCTTCCTTTGCGGAACGCTGTGTCGCCTTTG 135173 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 |||||||||| ||| | |||||||| || || ||||| |||||||||||||||| Sbjct 135172 CGGCCGTCGAAGGCATTTTCTTTTCCGGTTCCTTTTGTGCCATTTTTTGGCTCAAGAAAC 135113 Query 117114 GCGGCCTCATGCCCGGCC--TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCT 117171 | || ||||||||||| | || |||| |||||| | || | ||||| ||||| Sbjct 135112 GGGGTCTCATGCCCGGTCTTTGCTTTTC--CAACGAATTGATTAGTCGCGACGAAGGTCT 135055 Query 117172 GCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 |||||| || ||||||||| | |||| || Sbjct 135054 GCATTGTGATTTTGCCTGTCTACTGTACA 135026 >seq194 Length=282305 Score = 141 bits (156), Expect = 1e-28 Identities = 375/568 (66%), Gaps = 6/568 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||| ||||| || || |||||||| | ||| || | || || Sbjct 116351 ATCTGGCAAATGTACAAAAAAGCCGAAGCTTCTTTCTGGACGGCCGAAGAAATTGATTTG 116292 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| || | || ||| || ||| | |||||| || || || | ||| Sbjct 116291 GCCAGTGATTTGCAAGATTGGAAGAATTTGTCCAGCAACGAACGACACTTTGTGTCACAC 116232 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGT-CGAGCGTTT 116814 || |||| || || |||||| ||||| || || || || ||| ||| | | ||| Sbjct 116231 GTTTTGGCGTTCTTTGCCGCCTCGGACGGTATTGTGAATGAAAATTTGGCGCAAAACTTT 116172 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | | | | || | || || || || || || || || || || ||| | || Sbjct 116171 TGTACCGAAATT-CAATCACCAGAAGCCCGCTGTTTTTATGGATTCCAAATTGCCGTCGA 116113 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 ||| | || || | ||| ||| ||||| || || ||| | || | |||| Sbjct 116112 AAACATTCATAGTGAGACGTACTCGTTACTCATTGATACCTACATTCGTGACCCCAAGGA 116053 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 || | ||||||| ||||| || ||| | ||||| || || |||||||| | || Sbjct 116052 AAAAGATCATTTGTTGCGGGCCATTGATACGGTCCCGTGTGTACAAAAGAAGGCCAACTG 115993 Query 116995 GGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGC 117054 ||| ||| ||| | || || | || |||| | ||| || || || || || Sbjct 115992 GGCCTTGCAATGGTGTGACGCCAACCATGCTTCCTTTGCCGAACGTTGCGTCGCATTTGC 115933 Query 117055 GGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACG 117114 ||||||||| ||| | |||||||| ||| ||| ||||| || |||||||||||||| Sbjct 115932 GGCCGTCGAAGGCATTTTCTTTTCCGGCTCGTTCTGTGCCATTTTCTGGCTCAAGAAACG 115873 Query 117115 CGGCCTCATGCCCGG--CCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTG 117172 || || |||||||| ||| |||| ||| || | ||| | ||||| |||||| Sbjct 115872 GGGTCTTATGCCCGGTCTCTGCTTTTC--CAATGAATTGATCAGTCGCGACGAAGGTCTG 115815 Query 117173 CATTGCGACTTTGCCTGTTTGCTGTTCA 117200 ||||| || |||||||||||| ||| || Sbjct 115814 CATTGTGATTTTGCCTGTTTGTTGTACA 115787 >seq103 Length=133562 Score = 122 bits (134), Expect = 9e-23 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 |||| | ||||| |||||||||| |||||||| || ||| |||||||||||||| | Sbjct 27493 CCTTTGCGGAGCGATTGGTGGCCTTTGCGGCCGTGGAAGGCATCTTCTTTTCGGGCGCCT 27552 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146 | ||||| ||||||||||||||||| || ||||||||||| |||| |||||||| | Sbjct 27553 TTTGTGCCATTTTTTGGCTCAAGAAACGGGGACTCATGCCCGGATTGACGTTCAGCAATG 27612 Query 117147 AGCTCAT 117153 | ||||| Sbjct 27613 AACTCAT 27619 >seq208 Length=180812 Score = 105 bits (116), Expect = 7e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 117020 GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCG 117079 || ||| |||| | || || |||||||||| |||||||| || || ||||||||||| Sbjct 72887 GAAGCCTCCTTTGCGGAACGGTTGGTGGCCTTTGCGGCCGTGGAAGGGATCTTCTTTTCG 72946 Query 117080 GGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTC 117139 || ||| ||||| ||||||||||||||||| || || |||||||| |||| || Sbjct 72947 GGAGCTTTTTGTGCCATCTTTTGGCTCAAGAAACGAGGGCTGATGCCCGGTTTGACGTTT 73006 Query 117140 AGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 || || || ||||| | || || || ||||| || |||||||| ||||| Sbjct 73007 AGTAATGAACTCATTAGTCGCGATGAAGGACTGCACTGTTCGTTTGCCTGCCAGCTGT 73064 >seq226 Length=603765 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||||||| |||| || || || | Sbjct 85852 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 85793 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| || || || || | || || Sbjct 85792 GACACCATCGACAACG-TCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCA 85734 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| || || || ||||| || |||| ||||| | | ||||||||| Sbjct 85733 ACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAA 85674 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || | |||||||| Sbjct 85673 CATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCG 85638 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||||||| |||| || || || | Sbjct 86080 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 86021 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| || || || || | || || Sbjct 86020 GACACCATCGACAACG-TCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCA 85962 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| || || || ||||| || |||| ||||| | | ||||||||| Sbjct 85961 ACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAA 85902 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || | |||||||| Sbjct 85901 CATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCG 85866 >seq120 Length=609189 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || ||||||||| |||||||| || | ||||| || |||||||| |||| ||||| | Sbjct 561780 AATAATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCC 561839 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | ||||| || || | ||||| ||||| || || |||| Sbjct 561840 GTCTGACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGA 561899 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || || || || || | ||| || |||||| |||| || | || || || ||| || Sbjct 561900 TCAACAGCGTCTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGATTA 561959 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 |||||||||||| || | || ||||| | || | || ||| | || || || Sbjct 561960 CAACATCCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGGTGG 562013 >seq41 Length=265118 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 || || || ||||| ||||| | || |||||||| || || |||| ||||| | | Sbjct 262952 ATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCG 262893 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || |||| ||||| || || || || |||||||| Sbjct 262892 GACACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAG 262833 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | || || || ||| |||| || | ||||| | | ||| ||||| Sbjct 262832 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 262773 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || ||||| || ||||||| || ||||| ||| | || ||| Sbjct 262772 ATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGGC 262725 >seq2 Length=622807 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || ||||||||| |||||||| || | ||||| || |||||||| |||| ||||| | Sbjct 353078 AATAATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCC 353019 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | ||||| || || | ||||| ||||| || || |||| Sbjct 353018 GTCTGACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGA 352959 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || || || | || | ||| || |||||| |||| || | || || || |||||| Sbjct 352958 TCAACAGCGTTTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGACTA 352899 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 |||||| ||||| || | || ||||| | || | || ||| | || || || Sbjct 352898 CAACATTCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGGTGG 352845 >seq232 Length=134552 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 || || || ||||| ||||| | || || ||||| || || | |||||||| | | Sbjct 133269 ATTCAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCG 133210 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| ||||| | ||||| || || || || |||||||| Sbjct 133209 GACACGATCGATAATGTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCAG 133150 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | || || || ||| |||| || | ||||| | | ||| ||||| Sbjct 133149 CAACGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAAT 133090 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || ||||| ||| ||||||| || |||| ||| | || || Sbjct 133089 ATTCAAAAGGAAAGCACTTTGCATCTTGTTCTGCGATTGCGCGGTGG 133043 >seq82 Length=265081 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 || || || || || ||||| | || || ||||| || || |||| ||||| | | Sbjct 263232 ATTCAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCG 263173 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | ||||| || |||| ||||| || || || || ||||||| Sbjct 263172 GACACGATTGATAATG-TCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCA 263114 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||| | || || || ||| |||| || | ||||| | | ||| ||||| Sbjct 263113 GCAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAA 263054 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || ||||| || ||||||| || ||||| ||| | || ||| Sbjct 263053 TATTCAAAAGGAAAGTACTTTGCATCTTGTCTTGCGATTGCGCGGTGGC 263005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217300129200