Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq226 150 2e-31 seq41 136 3e-27 seq82 132 4e-26 seq232 116 3e-21 seq67 109 5e-19 seq142 107 2e-18 seq120 104 2e-17 seq2 98.7 9e-16 >seq226 Length=603765 Score = 150 bits (166), Expect = 2e-31 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| | | |||||||||||| | |||||||| || || |||||||| |||| Sbjct 85852 TACCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 85911 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| ||||| ||||||||||| ||||| || |||| | |||||| ||||| || | Sbjct 85912 TCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCG 85971 Query 118630 GTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTC 118687 | || || ||||||| ||| | | || || || || | |||| |||||| | | ||| Sbjct 85972 GAATTCCTTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTC 86029 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| | || || ||||||| ||| || || ||||||||||| Sbjct 86030 AACATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 Score = 141 bits (156), Expect = 8e-29 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | |||||||||||| | |||||||| || || |||||||| |||||| Sbjct 85626 CCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85685 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||||||||||| ||||| || |||| | |||||| ||||| || || Sbjct 85686 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85745 Query 118632 ATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 || || ||||||| ||| | | || || || || | |||| |||||| | | ||| | Sbjct 85746 ATTCCTTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAA 85803 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| | || || ||||||| ||| || || ||||||||||| Sbjct 85804 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 >seq41 Length=265118 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| |||| ||| || | || | ||| || |||||||| |||||||||||| Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||| | ||| ||||| || | |||||||| ||||| || || || Sbjct 262786 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGA 262845 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||||||| ||| || || || | |||| ||||||| |||||| Sbjct 262846 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACA 262905 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || | ||||||||||||| ||||| || |||||||| ||| Sbjct 262906 TCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq82 Length=265081 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| |||| ||| || | || | ||| || |||||||| |||||||||||| Sbjct 263006 CCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 263065 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||| | ||| ||||| || | |||||||| ||||| || ||||| Sbjct 263066 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 263125 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||||||| ||| || || || | || | ||||||| |||||| Sbjct 263126 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACA 263185 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || | ||||| || |||| ||||| ||||||||||| ||| Sbjct 263186 TCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq232 Length=134552 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607 || |||||||| ||||||||||| | |||||| ||| || | ||| || || || | Sbjct 133079 TCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAA 133138 Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667 |||||||| ||||| || ||||| || || ||||||||| ||||| || || | Sbjct 133139 ATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTA 133198 Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 |||| ||||||| |||||| || | || | ||||| ||||||| |||||| || Sbjct 133199 TCGATCGTGTCCGACGGCTCGACGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACG 133258 Query 118728 AAAATCTGCATG 118739 |||||||| ||| Sbjct 133259 AAAATCTGAATG 133270 >seq67 Length=439500 Score = 109 bits (120), Expect = 5e-19 Identities = 161/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| |||||||| | ||||| ||||| ||||| |||||||| |||| || || ||| Sbjct 2857 CAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACGTACGTCCATC 2916 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | ||||| || ||| | || | || || ||||| || || || ||||||||||| Sbjct 2917 TTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTC 2976 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || || || | |||| ||||||| ||| || || | ||| | || Sbjct 2977 TTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAATGGT 3036 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG-GCTTATTCTATT 118751 || || ||||| || ||||| ||||| |||||| |||||||||| Sbjct 3037 CTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGTTATTCTATT 3083 >seq142 Length=241092 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| |||||||| | || || ||||||||||| |||||||| |||| ||| || ||| Sbjct 170331 CAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTCAAAGTACGTCCATC 170390 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | ||||| || ||| | || | || || ||||| || || || ||||||||||| Sbjct 170391 TTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTC 170450 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || || || | |||| || |||| ||| || || | ||| | || Sbjct 170451 TTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATGGT 170510 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG--GCTTATTCTATT 118751 || || ||||| || ||||| ||||| |||||| || ||||||||| Sbjct 170511 CTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGC-TATTCTATT 170557 >seq120 Length=609189 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || |||| | ||||| || | || || ||||| || |||||||||||| Sbjct 562011 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGA 561952 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || || || ||| || | ||||||||| ||| | || |||||||| ||||| ||||| Sbjct 561951 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 561892 Query 118631 TATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || |||||||||| ||| | | || || || || | |||| ||||| | |||| Sbjct 561891 AATTCCCTCCTTGTCCTGGA--TCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCG 561834 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || | || || || |||| || ||||| || || ||||| Sbjct 561833 ACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq2 Length=622807 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || |||| | ||||| || | || || ||||| ||||||||||| ||| Sbjct 352847 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGA 352906 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || || || ||| || | ||||||||| ||| | || | |||||| ||||| ||||| Sbjct 352907 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGG 352966 Query 118631 TATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || |||||||||| ||| | | || || || || | |||| ||||| | |||| Sbjct 352967 AATTCCCTCCTTGTCCTGGA--TCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCG 353024 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || | || || || |||| || ||||| || || ||||| Sbjct 353025 ACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828840244140