Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq31 127 4e-24 seq226 122 2e-22 >seq31 Length=904706 Score = 127 bits (140), Expect = 4e-24 Identities = 187/261 (72%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 189450 TATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAA 189509 |||||||||| | || | ||| | ||||||||||| |||||| |||| | ||| Sbjct 56406 TATGGAACGCCGCGCAGCTCCAGTTAGTGAGAGAAGGTGGCATGCATGGTTTCATGAGAA 56465 Query 189510 TGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATA 189569 |||||||||| || ||||| ||||||||||| |||| ||| |||||||| | Sbjct 56466 TGTATTGGGCGAAAAAGATTCTTGAATGGACCGAGTCACCAGAAATCGCTTTGAAAACGA 56525 Query 189570 GTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAG--G 189627 || || || || ||| |||| || ||||| | ||||||||||||| || | | Sbjct 56526 GTCAATACTTCAATGACAGATACGCGCTTGACGGAAAAGATCCTAACGGATTTGTTGGAG 56585 Query 189628 TTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGG 189687 ||| ||| || | || | ||| |||||| || ||| |||||||||| | ||||| Sbjct 56586 TTGGATGGAGTAT-CATGGGCATT-CACGATCAAGGCTGGCAAGAAAGACCTGTCTTTGG 56643 Query 189688 AAAGATAAGATATATGAATTA 189708 ||||| ||||| |||||||| Sbjct 56644 CAAGATTAGATACATGAATTA 56664 >seq226 Length=603765 Score = 122 bits (134), Expect = 2e-22 Identities = 185/261 (71%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508 || ||||| ||| | || | ||| ||||||||||||| |||||| |||| | || Sbjct 209368 CTTTGGAATGCGGCGCAGCTCCAGTTGGTGAGAGAAGGTGGCATGCATGGTTTCATGAGA 209309 Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTAT 189568 ||||| ||||| || ||||| |||||||||||| |||| ||| ||||| | Sbjct 209308 ATGTACTGGGCGAAAAAGATTCTTGAATGGACTGAGTCACCGGAAATTGCTTTAAAAACG 209249 Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 ||| || || || ||| || | || ||||| | ||||||||||||| ||| || Sbjct 209248 AGTCAATACTTCAATGACAGATATGCGCTTGACGGAAAAGATCCTAACGGATTCGTTGGA 209189 Query 189629 TGTATGTGGTCTAT-TTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGG 189687 | ||| ||| || | ||| |||||| || |||| |||||||||| | ||||| Sbjct 209188 GTTGGCTGGAGTATCATGGGTATT-CACGATCAAGGGTGGCAAGAAAGACCAGTTTTTGG 209130 Query 189688 AAAGATAAGATATATGAATTA 189708 ||| || ||||| |||||||| Sbjct 209129 AAAAATCAGATACATGAATTA 209109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923193395711800