Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq41 104 3e-17 seq120 100 3e-16 seq82 100 3e-16 seq2 96.9 4e-15 seq142 93.3 5e-14 seq67 91.5 2e-13 seq232 87.8 2e-12 seq128 87.8 2e-12 seq61 87.8 2e-12 >seq41 Length=265118 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 || ||||| || | |||||| || || |||||||||||||||||||| || ||| || Sbjct 262735 AATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGT 262794 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || | |||||| || || || ||||| || |||||||| | ||| | | ||| Sbjct 262795 CCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCC 262854 Query 43086 TTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144 |||| | ||| | || || |||| | | | |||||| || || ||||||| ||| Sbjct 262855 TTGT-CTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGT 262913 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || | || || || || || || || Sbjct 262914 AATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq120 Length=609189 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||||||||| || || || || || |||||||| | ||| || || | || || Sbjct 561992 ACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCC 561933 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| || || ||||| || || ||||| || || | || | | |||||||||| | Sbjct 561932 AACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 561873 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | ||||| || || ||||||| ||||||||| || Sbjct 561872 ATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTA 561813 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 ||||| | |||||||| |||||||||||| || Sbjct 561812 CCCGTCAAGGTCTTTACGAAGATTTGCATTATT 561780 >seq82 Length=265081 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 || ||||| || | |||||| || || |||||||||||||||||||| || ||| || Sbjct 263015 AATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGT 263074 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || | |||||| || || || ||||| || |||||||| | || | | ||| Sbjct 263075 CCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCC 263134 Query 43086 TTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144 |||| | ||| | || || |||| | | | |||||| || || ||||||| ||| Sbjct 263135 TTGT-CTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGT 263193 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || | || || ||||| || || || Sbjct 263194 AATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAAT 263232 >seq2 Length=622807 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||||||||| || || || ||||| ||||| || | ||| || || | || || Sbjct 352866 ACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCC 352925 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| || || ||||| || | ||||| || || | || | | |||||||||| | Sbjct 352926 AACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 352985 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | ||||| || || ||||||| ||||||||| || Sbjct 352986 ATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTA 353045 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 ||||| | |||||||| |||||||||||| || Sbjct 353046 CCCGTCAAGGTCTTTACGAAGATTTGCATTATT 353078 >seq142 Length=241092 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| | |||||| ||||| ||||| ||| || |||||||||||||||||| | Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| || | || || | || ||||| ||||| || | ||| || || || | || Sbjct 170377 AAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 170436 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | ||||||||| ||| || |||| ||| | | | ||| || | || || Sbjct 170437 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTATCCGAAGGCTCAAC 170495 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || ||||| || ||||| || |||||||| || |||||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 >seq67 Length=439500 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| |||| | |||||| ||||| ||||| || || || ||||||||||||||| Sbjct 2842 TCCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACT 2901 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || | || ||||| ||||| || | ||| || || || | || Sbjct 2902 CAACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 2961 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| || |||| ||| | | | |||||| || || | Sbjct 2962 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACGGCTCAA 3020 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | || ||||| || ||||| || |||||||| || |||||||| Sbjct 3021 CGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 3069 >seq232 Length=134552 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 || |||| || | |||||| ||||| |||||||||||||||||||| | ||| || Sbjct 133052 AATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGT 133111 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || | ||||||||| || || ||||| || |||||||| | || | | ||| Sbjct 133112 CCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCC 133171 Query 43086 TTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 ||||| |||||| |||| | | | |||||| || || || || | ||| Sbjct 133172 TTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTA 133231 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || | || || || || || || || Sbjct 133232 ATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAAT 133269 >seq128 Length=686783 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | |||| || | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 511013 AAAAAATACTCCGCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 510954 Query 60118 CACCACTATACTACCGAGGAT 60138 ||||||||||| || |||| Sbjct 510953 AGCCACTATACTATCGCGGAT 510933 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 560759 CTCCGCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAGCCACTA 560818 Query 60126 TACTACCGAGGA 60137 ||||| || ||| Sbjct 560819 TACTATCGCGGA 560830 >seq61 Length=553271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 60470 AAAAAGTAGCTCCGCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 60529 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||| || ||| Sbjct 60530 TAGCCACTATACTATCGCGGA 60550 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 10074 CTCCGCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAGCCACTA 10015 Query 60126 TACTACCGAGGA 60137 ||||| || ||| Sbjct 10014 TACTATCGCGGA 10003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815491422600