Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq67 96.9 5e-15 seq120 84.2 3e-11 seq2 84.2 3e-11 >seq67 Length=439500 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 |||||||| ||| | || ||||| || || ||||||||||| ||||| ||||| Sbjct 2842 TCCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACT 2901 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | || | | ||| || |||||||| || || |||||||||| ||| |||||||| || Sbjct 2902 CAACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 2961 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||| || || ||||| Sbjct 2962 AATTCCCTCCTTGTCTTG 2979 >seq120 Length=609189 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| || || |||||||| || || ||||| || || |||| | ||| || Sbjct 561992 ACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCC 561933 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || |||||||| || ||||||| | || ||||||||||||||||| || || || || Sbjct 561932 AACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTG 561874 >seq2 Length=622807 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| || || |||||||| || || || || || || |||| | ||| || Sbjct 352866 ACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCC 352925 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || |||||||| || |||||||| | || ||||||||||||||||| || || || || Sbjct 352926 AACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTG 352984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743523658246400