Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq194 129 5e-25 seq98 122 8e-23 seq103 86.0 6e-12 >seq194 Length=282305 Score = 129 bits (142), Expect = 5e-25 Identities = 365/558 (65%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||| |||||||||||||||| |||||||| | ||| || || || || ||||| || Sbjct 115797 ACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAAAGCAGAG 115856 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 ||| ||||| || || ||||| || | ||| || || || || || || |||||||| Sbjct 115857 ACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGGAAAAGAA 115916 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 || ||||| || || |||||||| || | || || | | | || || || Sbjct 115917 AATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGGTTGGCGTC 115976 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 ||||| ||||| || || || | || ||||| | | || || || Sbjct 115977 ACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCAATGGCCCG 116036 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 || |||| || |||||| ||| || ||| || ||||| || ||||| ||| | Sbjct 116037 CAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTAACGAGTACGT 116096 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 || |||||| || || | || || || || |||||||| || | ||||| | | Sbjct 116097 CTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGCTTCTGGTGA 116156 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| | ||| | |||| ||| || || ||||| || || || || || || || Sbjct 116157 TTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGTCCGAGGCGGC 116216 Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTG---AAAGTTTTAACCA 16710 ||| ||||| | | |||| | ||| | | |||||| ||| ||| | || ||| Sbjct 116217 AAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTT-GCTGGACAAATTCTT--CCA 116273 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 || ||||| | | ||||| | ||||| | ||||| |||||||| | || || Sbjct 116274 ATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCTTCGGCTTT 116333 Query 16771 TTTATACATTTTCCATAT 16788 ||| ||||||| ||| || Sbjct 116334 TTTGTACATTTGCCAGAT 116351 >seq98 Length=427084 Score = 122 bits (134), Expect = 8e-23 Identities = 364/562 (65%), Gaps = 0/562 (0%) Strand=Plus/Plus Query 16227 ACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAA 16286 ||| || ||| |||||||||||||||| |||||||| | ||| || || ||||| |||| Sbjct 135029 ACAGTAGACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAA 135088 Query 16287 ATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAG 16346 | |||||| ||||| || || ||||| || | |||||| || || ||| ||||| | Sbjct 135089 AGCAAAGACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGG 135148 Query 16347 AAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttt 16406 ||||||| || ||||| || || ||||| || || | || || | | | || | Sbjct 135149 AAAAGAAAATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGT 135208 Query 16407 tactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTA 16466 | || ||||| ||||||| || || | || ||||| | | || | Sbjct 135209 TCGCGTCACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAA 135268 Query 16467 TTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAAC 16526 | || || |||| || || ||||| ||| ||| || ||||| || | | | Sbjct 135269 TGGCCCGCAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAG 135328 Query 16527 TATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTT 16586 ||| |||| ||||| || || | || || || || || ||||| || | |||| Sbjct 135329 AATAGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTT 135388 Query 16587 CGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGC 16646 | | ||| | ||| | |||| ||| ||| || ||||| || || || || ||| Sbjct 135389 CCGGCGATTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGG 135448 Query 16647 TAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTA 16706 || ||||| ||||| | | ||| | ||| | |||||| || | | | Sbjct 135449 ACGCGGCAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGTTGCTCGACAAATGTT 135508 Query 16707 ACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAG 16766 ||| || ||||| | | | ||| | ||||| | |||||||| ||||| | | Sbjct 135509 TCCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTTCGG 135568 Query 16767 CCTTTTTATACATTTTCCATAT 16788 | ||||| ||||||| ||| || Sbjct 135569 CTTTTTTGTACATTTGCCAGAT 135590 >seq103 Length=133562 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || ||||| ||| ||||||||||| || | ||| || | || || || || | Sbjct 27655 CAGGCAAACGAACAGTGCAATCCTTCATCACGACTAATGAGTTCATTGCTGAACGTCAAT 27596 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| ||||| ||||| || | |||||| || || ||| | || |||||||| Sbjct 27595 CCGGGCATGAGTCCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGCGCCCGAAAAGAAG 27536 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTC 16389 || ||||| || || ||||| || ||||||||||| Sbjct 27535 ATGCCTTCCACGGCCGCAAAGGCCACCAATCGCTC 27501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510294487000