Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq194 149 6e-31 seq98 149 6e-31 >seq194 Length=282305 Score = 149 bits (164), Expect = 6e-31 Identities = 372/561 (66%), Gaps = 8/561 (1%) Strand=Plus/Plus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 ||||| |||||||||||||| || || || || | ||| || | ||| || ||||| Sbjct 115795 AAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAAAGCAG 115854 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 | || ||||| | || ||||| || | ||| || || ||| ||| || ||||||||| Sbjct 115855 AGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGGAAAAG 115914 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380 || || || || || || ||||| || | | ||||| |||| || || | ||| | Sbjct 115915 AAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGGTTGG-C 115973 Query 14381 GATATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 | | | || | || |||| | | || |||| | | | | || ||||| || Sbjct 115974 GTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCAATGGC 116033 Query 14440 ATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 || ||||| || || || || | |||||| |||||||| ||||| || Sbjct 116034 CCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTAACGAGTA 116093 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 | | ||| || |||||||| | || || || || ||||||||||| | ||||||| Sbjct 116094 CGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGCTTCTGG 116153 Query 14560 CCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 |||| | || | |||| ||| |||||||||||||| || ||||| || || Sbjct 116154 TGATTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGTCCGAGGC 116213 Query 14620 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG---AGTTTTTT 14676 ||||| || ||||| | || | | ||||| | | ||| |||||| | || || Sbjct 116214 GGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCG---TTCGTTGCTGGACAAATTCTT 116270 Query 14677 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGC 14736 |||||| ||||| | | | ||| | ||| || | ||||| ||| ||| | || Sbjct 116271 CCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCTTCGGC 116330 Query 14737 TTTTTTATACATTACCCATAT 14757 |||||| |||||| ||| || Sbjct 116331 TTTTTTGTACATTTGCCAGAT 116351 >seq98 Length=427084 Score = 149 bits (164), Expect = 6e-31 Identities = 374/565 (66%), Gaps = 14/565 (2%) Strand=Plus/Plus Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 || ||| |||||||||||||| || || || || | |||||| | |||||| ||||| Sbjct 135033 TAGACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAAAGCA 135092 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 | || ||||| | || ||||| || | |||||| || ||| || || |||||||| Sbjct 135093 AAGACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGGAAAA 135152 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||| || || || || || ||||| || | | ||||| |||| || || ||||| Sbjct 135153 GAAAATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGC---GTTGTT 135209 Query 14380 CG----ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 || | | ||||| ||||| | | || |||| | | | | || |||| Sbjct 135210 CGCGTCACA-CCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAA 135268 Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGC 14495 | || || ||||| ||||||||||| | | |||||| |||||||| | | Sbjct 135269 TGGCCCGCAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAG 135328 Query 14496 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14555 ||| |||| ||| |||||||| | || || || || || |||||||| | |||| Sbjct 135329 AATAGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTT 135388 Query 14556 CTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615 | | | |||| | || | |||| ||| |||||||||||||| || || || || Sbjct 135389 CCGGCGATTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGG 135448 Query 14616 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCT---GAGTT 14672 || ||||| || ||||| | || | |||| || ||| ||||| | | Sbjct 135449 ACGCGGCAAAGAACGCCAACACGTGCGACACAAAG---TGACGTTCGTTGCTCGACAAAT 135505 Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732 ||||||||| ||||| | | ||||| | ||| || | |||||||| ||| Sbjct 135506 GTTTCCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTT 135565 Query 14733 CAGCTTTTTTATACATTACCCATAT 14757 | |||||||| |||||| ||| || Sbjct 135566 CGGCTTTTTTGTACATTTGCCAGAT 135590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343821350600