Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq128 134 3e-26 seq61 127 4e-24 seq168 93.3 8e-14 seq10 93.3 8e-14 seq194 89.7 1e-12 seq98 84.2 4e-11 >seq128 Length=686783 Score = 134 bits (148), Expect = 3e-26 Identities = 322/475 (68%), Gaps = 14/475 (3%) Strand=Plus/Minus Query 35152 CGATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCG 35211 |||| |||| || || || || | || | ||||| | |||||| | || || || || Sbjct 552537 CGATCGAACGGGCACCGGCACCGTCTCGCTGTTTGGTGCGCAAATGCGCTTTTCACTGCG 552478 Query 35212 AGACGACACTATTCCAGTT-CTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAG 35270 |||| | ||| | ||| ||||| ||||| | ||||||||||| || | |||| Sbjct 552477 CGACGGT-CGATTGCCGTTACTCACCACCAAACGCACGTTCTGGAGAGGCGTCGCCGAAG 552419 Query 35271 AACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATAC 35330 || | | ||||||||| ||||||||| |||| || || | ||| ||||| || | Sbjct 552418 AATTGTTGTGGTTCATTCAGGGCAATACGAACGCGAATGATCTCGCCGCCAAGAATATTC 552359 Query 35331 ACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGA-CAGTAGAGGGTTATACG-ATAG 35388 |||||||| | | ||||| ||||| || ||| | || |||| ||| | ||| || | Sbjct 552358 ACATCTGGGATGGCAATGGTTCGCGCGAGTTTCTCGATCAGT--TGGGATTGACGCATCG 552301 Query 35389 AGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT- 35447 | || || || | |||||||| ||||| ||||| |||||||| ||||| || || | Sbjct 552300 ACAAGTCGGGGACCTTGGACCCGTGTACGGCTTCCAGTGGCGTCACTTTGGAGCCGAGTA 552241 Query 35448 --ATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACT 35505 | |||| || | ||||||| || ||| |||| || || || |||| || | Sbjct 552240 CAAAGATA--TGCAC-GCCGATTACACCGGACAGGGCATCGACCAGCTGGCGGATTGCAT 552184 Query 35506 AAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTA 35564 | | | | |||| |||| || ||| | | || | ||||||| |||||||| | Sbjct 552183 CGATAAAATTA-AGAATCATCCCGAAGATCGGCGCATTGTCTTGACGGCCTGGAATCCCA 552125 Query 35565 TGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 ||| | | ||||||| | ||||| || || ||| | ||| |||||||| Sbjct 552124 AGGACTTGCCGATTATGGCGTTGCCTCCGTGTCATATGTTTTGTCAGTTTTATGT 552070 >seq61 Length=553271 Score = 127 bits (140), Expect = 4e-24 Identities = 317/471 (67%), Gaps = 8/471 (2%) Strand=Plus/Plus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGA 35212 ||| |||| || || || || | || | ||||| | |||||| | || || || || Sbjct 18335 GATCGAACGGGCACCGGCACCGTCTCGCTGTTTGGTGCGCAAATGCGCTTTTCACTCCGC 18394 Query 35213 GACGACACTATT-CCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGA 35271 | | | ||| || ||||||| ||||| || ||||||||||| || | ||||| Sbjct 18395 CAGGGT-CGATTGCCTCTTCTCACCACCAAACGAACCTTCTGGAGAGGCGTGGCCGAAGA 18453 Query 35272 ACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACA 35331 | | | |||||| || ||| ||||| ||||||| || | ||| |||||||| || Sbjct 18454 ATTGTTGTGGTTTATTCAGGGAAATACGAACGCCAATGATCTCGCCGCCAAGAAGATTCA 18513 Query 35332 CATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGA-CAGTAGAGGGTTATACGATAGAG 35390 ||| ||| | | ||||| |||||||| || | || |||| | || || | || || Sbjct 18514 CATTTGGGATGGCAATGGTTCGCGGGAGTTCCTCGATCAGTTG-GGATTGAAACATCGAC 18572 Query 35391 CAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATG 35450 || || || | |||||||| ||||| ||||| |||||||| ||||| || || || Sbjct 18573 AAGTTGGGGACCTCGGACCCGTGTACGGTTTCCAGTGGCGTCACTTTGGAGCCGAGTACC 18632 Query 35451 ATACCTGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGC-CAATATACTAAA 35508 | | | | | | ||||||| || ||| |||| || ||||| |||| | | | | Sbjct 18633 A-AGATATGCATACCGATTACACCGGACAGGGCATCGATCAGCTGGCGGACTGCATCGAT 18691 Query 35509 GACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568 | | ||| | |||| || || || | || | ||||||| |||||||| | ||| Sbjct 18692 AAAATTAAGA-ATCATCCCGAAGACCGACGCATTGTGTTGACGGCCTGGAATCCCAAGGA 18750 Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | | ||||||| | ||||| || || ||| | ||| |||||||| Sbjct 18751 CTTGCCGATTATGGCGTTGCCTCCGTGTCATATGTTTTGTCAGTTTTATGT 18801 >seq168 Length=39825 Score = 93.3 bits (102), Expect = 8e-14 Identities = 165/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||||| || |||||||||||| || | ||| || ||||| |||||||| Sbjct 28819 CCGATACCTCCGGCGTACTTGGAGATGATGGCGCAGTTCTTGAGCGTATCGTAAATACCT 28760 Query 94846 TCAATGCTATCAT-CTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 ||||| ||| | ||| | || || | ||||||||| || | |||||| || || Sbjct 28759 TCAATTGAATCCTGCTTCATGG-TGAGCAAGAAGCACGATGACATTTGGGGCATGTTGGT 28701 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| || || || ||||| | ||| || ||||| || | |||| | | | || Sbjct 28700 TCCGGCGTTGAAGAGCGTGGGCGTAGCGTGCGTAAAGTACCGATTCGAAAGGTCGTTGTA 28641 Query 94965 TGTTTCAATGACAGATTT---GATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 || |||||||| ||| |||||| ||||||||| |||||||| |||||||| Sbjct 28640 GGTCTCAATGAC---TTTGGGGATGTCATCTCCGTGAATACCGACAGCAACACGCAT 28587 >seq10 Length=152390 Score = 93.3 bits (102), Expect = 8e-14 Identities = 165/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||||||||| |||||||||||| || | |||||| ||||| || ||||| Sbjct 133206 CCGATACCTCCAGCATACTTGGAGATGATGGCGCAGTTCTTAAGCGTATCGTAGATACCT 133147 Query 94846 TCAATGCTATCAT-CTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 ||||| || | ||| | || || | ||||||||| || | ||| || || || Sbjct 133146 TCAATAGAGTCCTGCTTCATGG-TGAGCAAGAAGCACGACGACATTTGCGGCATGTTGGT 133088 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || || ||||| | ||| || ||||| || | |||| | | | || Sbjct 133087 TCCGGCATTGAAGAGCGTGGGCGTAGCGTGCGTAAAGTACCGATTCGAAAGGTCGTTGTA 133028 Query 94965 TGTTTCAATGACAGATTT---GATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 || |||||||| ||| |||||| ||||||||| || ||||| |||||||| Sbjct 133027 GGTCTCAATGAC---TTTGGGGATGTCATCTCCGTGAATTCCAACAGCAACACGCAT 132974 >seq194 Length=282305 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || ||||| || || ||||| || |||||| || | ||| ||||||||||| Sbjct 115943 GTCGCATTTGCGGCCGTCGAAGGCATTTTCTTTTCCGGCTCGTTCTGTGCCATTTTCTGG 115884 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| ||||| || |||| |||||| || |||||||| || || | | ||| Sbjct 115883 CTCAAGAAACGGGGTCTTATGCCCGGTCTCTGCTTTTCCAATGAATTGATCAGTCGCGAC 115824 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGT 102071 |||||||| ||| | || ||||| || || ||| Sbjct 115823 GAAGGTCTGCATTGTGATTTTGCCTGTTTGTTGT 115790 >seq98 Length=427084 Score = 84.2 bits (92), Expect = 4e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || ||||||| ||| |||||||| || || ||||| || |||||| ||| | || Sbjct 135197 TTTGCGGAACGCTGTGTCGCCTTTGCGGCCGTCGAAGGCATTTTCTTTTCCGGTTCCTTT 135138 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 ||||||| ||| ||||||| ||||| | |||| ||||| || ||||| || Sbjct 135137 TGTGCCATTTTTTGGCTCAAGAAACGGGGTCTCATGCCCGGTCTTTGCTTTTCCAACGAA 135078 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGT 102071 || ||| | | ||||||||||| ||| | || ||||| || | |||| Sbjct 135077 TTGATTAGTCGCGACGAAGGTCTGCATTGTGATTTTGCCTGTCTACTGT 135029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580259681725