Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq61 95.1 1e-14 seq128 82.4 7e-11 >seq61 Length=553271 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 20969 GTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGC 21028 ||| ||||| |||||||| | | ||||| ||||||||||||| | ||||| ||| || Sbjct 19010 GTGAACAAACTCTCCCGGTTTTCGTCCCGTAACGTGAGCGATCATGTGCGTCAAGAGAGC 18951 Query 21029 GTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTG 21088 |||||| || ||||| ||||| || || || |||||||| || | ||| |||| ||| Sbjct 18950 GTAGCTCGCAATGTTGAACGGAACTCCAAGCCCCATGTCCGCACTACGCTGATACAACTG 18891 Query 21089 GCAGGACAGCTC 21100 || || || || Sbjct 18890 ACACGAGAGTTC 18879 >seq128 Length=686783 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/227 (69%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 || ||||||||||| || | ||||| ||||| | ||||| || | |||| ||| Sbjct 552070 ACATAAAACTGACAAAACATATGACACGGAGGCAACGCCATAATCGGCAAGTCCTTGGGA 552129 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACG 21230 ||||| || || || ||||||||||| | ||| | | |||||| || | | | Sbjct 552130 TTCCAGGCCGTCAAGACAATGCGCCGATCTTCGGGATGATTCTTAATTTTAT---CGATG 552186 Query 21231 TAA--CG-CAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCC 21287 || || ||||||||| | ||||| || ||| | ||||| | ||||||| Sbjct 552187 CAATCCGCCAGCTGGTCGATGCCCTGTCCGGTGTAATCGGCGTGCATATCTTTGTACTCG 552246 Query 21288 GCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 || ||||| || | ||||||||| |||||||| || || || || || Sbjct 552247 GCTCCAAAGTGACGCCACTGGAAGCCGTACACGGGTCCAAGGTCCCC 552293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774462011600