Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq98 118 8e-22 seq194 96.9 2e-15 seq103 91.5 1e-13 seq208 87.8 1e-12 >seq98 Length=427084 Score = 118 bits (130), Expect = 8e-22 Identities = 119/152 (78%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||||||||| || |||||| | | ||||| || || ||| ||||| || ||||| Sbjct 135179 GCCTTTGCGGCCGTCGAAGGCATTTTCTTTTCCGGTTCCTTTTGTGCCATTTTTTGGCTC 135120 Query 22810 AAGAAACGTTCGCTCATGCCAGGG-TTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGA 22868 |||||||| |||||||| || || || ||||||||||| |||||||| || ||||| Sbjct 135119 AAGAAACGGGGTCTCATGCCCGGTCTTTGC-TTTTCCAACGAATTGATTAGTCGCGACGA 135061 Query 22869 AGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 |||||| || ||||| ||||| ||| | |||| Sbjct 135060 AGGTCTGCATTGTGATTTTGCCTGTCTACTGT 135029 >seq194 Length=282305 Score = 96.9 bits (106), Expect = 2e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || |||||||| || |||||| | | ||||| || || || ||||| |||||||| Sbjct 115940 GCATTTGCGGCCGTCGAAGGCATTTTCTTTTCCGGCTCGTTCTGTGCCATTTTCTGGCTC 115881 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| || ||||| || | |||||||| || ||||| || || |||||| Sbjct 115880 AAGAAACGGGGTCTTATGCCCGGTCTCTGCTTTTCCAATGAATTGATCAGTCGCGACGAA 115821 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 ||||| || ||||| ||||| ||| || ||| Sbjct 115820 GGTCTGCATTGTGATTTTGCCTGTTTGTTGT 115790 >seq103 Length=133562 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||||||||| || |||||| || | ||||| || | ||| ||||| || |||| Sbjct 27511 TGGCCTTTGCGGCCGTGGAAGGCATCTTCTTTTCGGGCGCCTTTTGTGCCATTTTTTGGC 27570 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| |||||||| || ||| |||| ||| || | ||||| ||||| | Sbjct 27571 TCAAGAAACGGGGACTCATGCCCGGATTGACGTTCAGCAATGAACTCATTAGTCGTGATG 27630 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 |||| | |||||| ||||| || ||||| Sbjct 27631 AAGGATTGCACTGTTCGTTTGCCTGCCAGCTGT 27663 >seq208 Length=180812 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||||||||| || ||||| || | ||||| || | ||| ||||| || |||| Sbjct 72912 TGGCCTTTGCGGCCGTGGAAGGGATCTTCTTTTCGGGAGCTTTTTGTGCCATCTTTTGGC 72971 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| ||| ||||| || ||| ||||| || || | ||||| || || | Sbjct 72972 TCAAGAAACGAGGGCTGATGCCCGGTTTGACGTTTAGTAATGAACTCATTAGTCGCGATG 73031 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 |||| || |||||| ||||| || ||||| Sbjct 73032 AAGGACTGCACTGTTCGTTTGCCTGCCAGCTGT 73064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232319228885